RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Ythdc1E9Q5K9 736 aaKnown RBP9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 PnnO35691 725 aaKnown RBP9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Mre11Q61216 706 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Jakmip1Q8BVL9 626 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Sumf1Q8R0F3 372 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Akt1s1Q9D1F4 257 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Sytl4Q9R0Q1 673 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Flt4P35917 1363 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 LifrP42703 1092 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Nwd2Q6P5U7 1742 aa9.13□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Tpx2A2APB8 745 aaKnown RBP9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Dhx38Q80X98 1228 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Anxa1P10107 346 aaKnown RBP9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Pdia3P27773 505 aaKnown RBP9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Nol8Q3UHX0 1147 aaKnown RBP9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 EspnlQ3UYR4 1005 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ppip5k2Q6ZQB6 1129 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 4930504O13RikQ8C5Z9 145 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Tm6sf1P58749 370 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ppfia3P60469 1194 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Rbm26Q6NZN0 1012 aaKnown RBP9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Susd4Q8BH32 490 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Amhr2Q8K592 568 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Il1rapl2Q9ERS6 686 aa9.12□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 NppbP40753 121 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Stk36Q69ZM6 1316 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Cgnl1Q6AW69 1298 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Cacna1sQ02789 1880 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 AK157302I3ITR1 129 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Fam198bQ3UPI1 517 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Wwc1Q5SXA9 1104 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Isca1Q9D924 129 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Slurp2P0DP59 97 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ercc3P49135 783 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Tceanc2Q8R2M0 207 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Kif2cQ922S8 721 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Foxo3Q9WVH4 672 aa9.11□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 MetP16056 1379 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Prr29B1ARI9 187 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 VgfQ0VGU4 617 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Babam1Q3UI43 333 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Slc26a8Q8R0C3 999 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Gcc1Q9D4H2 778 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Tnrc6cQ3UHC0 1690 aaKnown RBP9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Mmp8O70138 465 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Wdhd1P59328 1117 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Cpa2Q504N0 417 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ltv1Q6NSQ7 470 aaKnown RBP9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Brf1Q8CFK2 676 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 RestQ8VIG1 1082 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Sos2Q02384 1333 aa9.1□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Mcmdc2E9Q956 681 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Clca2Q8BG22 942 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Zbtb3Q91X45 518 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 FocadA2AKG8 1798 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ltbp1Q8CG19 1712 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Cyp19a1P28649 503 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Ezh2Q61188 746 aaKnown RBP9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Arid3aQ62431 601 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 CpvlQ9D3S9 478 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Fer1l6E0CZ42 1862 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Zbtb38Q3LR78 1197 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Rab3gap1Q80UJ7 981 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 OscarQ8VBT3 265 aa9.09□□□□□ -0.95
Crnkl1-201ENSMUST00000001818 Zkscan2G3X952 960 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Terf2O35144 541 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Timm10P62073 90 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Rassf8Q8CJ96 419 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Ppp6r3Q922D4 844 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 MecomP14404 1042 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Itga6Q61739 1091 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Htatsf1Q8BGC0 757 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Rbm33Q9CXK9 1231 aaKnown RBP9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Kif23E9Q5G3 953 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Snai1Q02085 264 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Ell2Q3UKU1 639 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Tmem87bQ8BKU8 555 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Popdc2Q9ES82 367 aa9.08□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Prl3d3A0A0M6L0J6 224 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Gm7347D3YYI9 267 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Speer4aF8VPX6 267 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 FosbP13346 338 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Hmgb2P30681 210 aaKnown RBP9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 CpzQ8R4V4 654 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Erc2Q6PH08 957 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Ncoa5Q91W39 579 aaKnown RBP9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Clstn1Q9EPL2 979 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Tnks1bp1P58871 1720 aa9.07□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Nucb1Q02819 459 aaKnown RBP9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Hs1bp3Q3TC93 395 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Tmem143Q8VD26 458 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 CoblQ5NBX1 1337 aaKnown RBP9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 PogkQ80TC5 607 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Aldh8a1Q8BH00 487 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Mlh1Q9JK91 760 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 IncenpQ9WU62 880 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Sult6b1P0CC03 303 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Ssh1Q76I79 1042 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 Sh3bp5Q9Z131 463 aa9.06□□□□□ -0.96
Crnkl1-201ENSMUST00000001818 InsrrQ9WTL4 1300 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms