RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	AAGAB	Q6PD74	315 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	ENPP6	Q6UWR7	440 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	SEM1	Q6ZVN7	128 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	GALNT10	Q86SR1	603 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	LACC1	Q8IV20	430 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	OR2M3	Q8NG83	312 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	DUSP19	Q8WTR2	217 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	OTUB1	Q96FW1	271 aa	Predicted RBP	13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	CHMP6	Q96FZ7	201 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	SFXN2	Q96NB2	322 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	ACTRT3	Q9BYD9	372 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	RTN4R	Q9BZR6	473 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	UCK2	Q9BZX2	261 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	PIGU	Q9H490	435 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	KCNJ16	Q9NPI9	418 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	GPATCH2	Q9NW75	528 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	GIN1	Q9NXP7	522 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	MED11	Q9P086	117 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	MARCO	Q9UEW3	520 aa	Predicted RBP	13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	FAF1	Q9UNN5	650 aa	Predicted RBP	13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	LRBA	P50851	2863 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	NKX2-6	A6NCS4	301 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	RNASET2	O00584	256 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	KLF11	O14901	512 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	ANKRD28	O15084	1053 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	TOX	O94900	526 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	SOX30	O94993	753 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	SNRPB2	P08579	225 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	KIT	P10721	976 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	CPN1	P15169	458 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	TBXA2R	P21731	343 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	SOAT1	P35610	550 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	CLNS1A	P54105	237 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	WNT3	P56703	355 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	POU6F2	P78424	691 aa	Predicted RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	C17orf67	Q0P5P2	114 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	GANAB	Q14697	944 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	DPY19L1	Q2PZI1	675 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	ANXA8L1	Q5VT79	327 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	BHLHB9	Q6PI77	547 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	APOOL	Q6UXV4	268 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	SPATA19	Q7Z5L4	167 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	WDR75	Q8IWA0	830 aa	Known RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	CLECL1	Q8IZS7	167 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	OR5AK3P	Q8NH89	298 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	ADAMTS15	Q8TE58	950 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	CDS1	Q92903	461 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	TESC	Q96BS2	214 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	ATP6V1G3	Q96LB4	118 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	G6PC3	Q9BUM1	346 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	PTGES2	Q9H7Z7	377 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	HHATL	Q9HCP6	504 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	FBXO34	Q9NWN3	711 aa		13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.64	□□□□□ -0.23
PHGDH-231	ENST00000641939	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	IGLV3-32	A0A0A0MS00	114 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	GOLGA8Q	A0A0J9YX86	632 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	PRSS51	A0A1B0GVH4	220 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	GOLGA8O	A6NCC3	632 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	CD8B2	A6NJW9	211 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	HSPB2	A8KAH6	182 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	KDM4E	B2RXH2	506 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	ALG1L2	C9J202	215 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	GOLGA8N	F8WBI6	632 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	OXSR1	O95747	527 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	ANGPTL1	O95841	491 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	ALDOC	P09972	364 aa	Known RBP	13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	TCEA1	P23193	301 aa	Known RBP	13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	CHM	P24386	653 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	EPHA3	P29320	983 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	TIMP3	P35625	211 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	TFF3	Q07654	80 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	RCAN2	Q14206	197 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	HSPB2	Q16082	182 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	NSUN5P2	Q63ZY6	315 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZAR1	Q86SH2	424 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	MCEMP1	Q8IX19	187 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	VPS37A	Q8NEZ2	397 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	OR4C3	Q8NH37	302 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZPLD1	Q8TCW7	415 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	ZNF75CP	Q92670	426 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	TRIB1	Q96RU8	372 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	SPOCK3	Q9BQ16	436 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	ENKD1	Q9H0I2	346 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	CALHM2	Q9HA72	323 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	UBQLN4	Q9NRR5	601 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939	PCDHGB4	Q9UN71	923 aa		13.63	□□□□□ -0.23
PHGDH-231	ENST00000641939		E9PBE3	544 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939		H0Y3Z8	333 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	NDUFB5	O43674	189 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	SCN2B	O60939	215 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	IL2RA	P01589	272 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	PRF1	P14222	555 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	HPGD	P15428	266 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	HK1	P19367	917 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	ATP6V1C1	P21283	382 aa		13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	CEACAM8	P31997	349 aa	Predicted RBP	13.62	□□□□□ -0.23
PHGDH-231	ENST00000641939	STAR	P49675	285 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms