RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PLXND1Q9Y4D7 1925 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 J3QLW9 94 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 FZD6O60353 706 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 GPR37L1O60883 481 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ATG12O94817 140 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 IGLV3-27P01718 113 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF19P17023 458 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 NPR2P20594 1047 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 RECQLP46063 649 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ASMTP46597 345 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 C6orf120Q7Z4R8 191 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 PAQR7Q86WK9 346 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 TMEM99Q8N816 258 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 CYB561A3Q8NBI2 242 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 C17orf47Q8NEP4 570 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 CHTF18Q8WVB6 975 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 NKX3-1Q99801 234 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 REG4Q9BYZ8 158 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 TEX10Q9NXF1 929 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 COPZ2Q9P299 210 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ENOPH1Q9UHY7 261 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ATPIF1Q9UII2 106 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 GMEB2Q9UKD1 530 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 A4GNTQ9UNA3 340 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 YIPF1Q9Y548 306 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 TRDV1A0A1B0GX56 115 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 A0A1W2PRU2 124 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 PRAMEF27A3QJZ7 478 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 FAM170BA6NMN3 283 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 G3V3Q6 166 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 VNN2O95498 520 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ADH7P40394 386 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 PCBP3P57721 371 aaKnown RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 FAM26EQ8N5C1 309 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 POP5Q969H6 163 aaKnown RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 LRIG1Q96JA1 1093 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 GAL3ST1Q99999 423 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 RNF208Q9H0X6 261 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 NTMQ9P121 344 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 KLK11Q9UBX7 282 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 RALGAPA2Q2PPJ7 1873 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 TDRD15B5MCY1 1934 aaKnown RBP12.88□□□□□ -0.35
SCARB2-227ENST00000640957 PRODHO43272 600 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ACRP10323 421 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 CLUP10909 449 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 HK1P19367 917 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 F8A1P23610 371 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 SLC27A4Q6P1M0 643 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 HDDC2Q7Z4H3 204 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 OR5M3Q8NGP4 307 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 SORCS1Q8WY21 1168 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 SARGQ9BW04 601 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 FKRPQ9H9S5 495 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-227ENST00000640957 MRTO4Q9UKD2 239 aaKnown RBP12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ERVK-19Q9WJR5 959 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 F5P12259 2224 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 A0A1W2PS29 197 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 FAAHO00519 579 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ERAL1O75616 437 aaKnown RBP12.88□□□□□ -0.35
SCARB2-227ENST00000640957 NMBP08949 121 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ATP1B2P14415 290 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-227ENST00000640957 SERPINA4P29622 427 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 SFXN4Q6P4A7 337 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF433Q8N7K0 673 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ARIH2OSQ8N7S6 290 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF671Q8TAW3 534 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 CASD1Q96PB1 797 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 NPAS1Q99742 590 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 MICU1Q9BPX6 476 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 DPH7Q9BTV6 452 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 POLDIP3Q9BY77 421 aaKnown RBP12.88□□□□□ -0.35
SCARB2-227ENST00000640957 FBXL4Q9UKA2 621 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 CASP8AP2Q9UKL3 1982 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 MYOFQ9NZM1 2061 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 DOCK6Q96HP0 2047 aa12.88□□□□□ -0.35
SCARB2-227ENST00000640957 A0A087WUU8 490 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 FEZF1A0PJY2 475 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 ZNF98A6NK75 572 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 SOX30O94993 753 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 IMPA1P29218 277 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 CD70P32970 193 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 EPHB3P54753 998 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 HTR4Q13639 388 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 ELOAQ14241 798 aaKnown RBP12.87□□□□□ -0.35
SCARB2-227ENST00000640957 TCTN1Q2MV58 587 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 AKIRIN2Q53H80 203 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 SPIN4Q56A73 249 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 MED27Q6P2C8 311 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 SLC36A4Q6YBV0 504 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
SCARB2-227ENST00000640957 ING5Q8WYH8 240 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms