RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 OR5P2Q8WZ92 322 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 LRRC46Q96FV0 321 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 CHMP6Q96FZ7 201 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 PGM2Q96G03 612 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 C16orf58Q96GQ5 468 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 PRPF18Q99633 342 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 PAIP2Q9BPZ3 127 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 KCNN3Q9UGI6 736 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 RAP2CQ9Y3L5 183 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 ACTL7BQ9Y614 415 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 KCNK2O95069 426 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 ANGPTL1O95841 491 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 C6orf47O95873 294 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 TMIGD3P0DMS9 266 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 ZNF708P17019 499 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 CTSSP25774 331 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 CLDN18P56856 261 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 B3GALT5-AS1P59052 145 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 EMX2Q04743 252 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 C17orf67Q0P5P2 114 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 SNTB1Q13884 538 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 LASP1Q14847 261 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 LSM12Q3MHD2 195 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 SPDYE7PQ495Y7 208 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 ZCCHC12Q6PEW1 402 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 POMZP3Q6PJE2 187 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 ARSKQ6UWY0 536 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 PLXDC2Q6UX71 529 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 APOOLQ6UXV4 268 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 UBQLNLQ8IYU4 475 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 NATD1Q8N6N6 113 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 ANKRD42Q8N9B4 389 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 COQ8BQ96D53 544 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 G6PC3Q9BUM1 346 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 C20orf27Q9GZN8 174 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 NOP53Q9NZM5 478 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 L3MBTL1Q9Y468 752 aa15.17■□□□□ 0.02
CACNA1A-259ENST00000638114 EEF1E1-BLOC1S5C9J1V9 151 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 SYT5O00445 386 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CFLARO15519 480 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 EEF1E1O43324 174 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 SNUPNO95149 360 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 OXSR1O95747 527 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 HMGN2P05204 90 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 POU3F2P20265 443 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CAPN3P20807 821 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 OPRM1P35372 400 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CCT3P49368 545 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 RPL14P50914 215 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 DIO3P55073 304 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 POU6F2P78424 691 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 STX3Q13277 289 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 TP53BP2Q13625 1128 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 PGS1Q32NB8 556 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CCNJQ5T5M9 372 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CHMP1BQ7LBR1 199 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 ZAR1Q86SH2 424 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 ADGRE4PQ86SQ3 457 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 TMEM200AQ86VY9 491 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 GRAMD2AQ8IUY3 354 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 RIMKLAQ8IXN7 391 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 GATSQ8NAP1 163 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 OR56A1Q8NGH5 318 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 OR5M1Q8NGP8 315 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 OR4C3Q8NH37 302 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 FAM110BQ8TC76 370 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 RNASE6Q93091 150 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 WNT2BQ93097 391 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 C1GALT1C1Q96EU7 318 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 SORT1Q99523 831 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 TM9SF2Q99805 663 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 SH3GL2Q99962 352 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 DUSP26Q9BV47 211 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 BHLHE41Q9C0J9 482 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CXorf36Q9H7Y0 433 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 AKTIPQ9H8T0 292 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 ASIC5Q9NY37 505 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CLCF1Q9UBD9 225 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 ANKHD1Q8IWZ3 2542 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 PCNX3Q9H6A9 2034 aa15.16■□□□□ 0.02
CACNA1A-259ENST00000638114 CSMD2Q7Z408 3487 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 CCDC168Q8NDH2 2452 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 ALG1L2C9J202 215 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 NDUFB5O43674 189 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 NGFRP08138 427 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 PEPDP12955 493 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 HPGDP15428 266 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 SOAT1P35610 550 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 KIR2DL3P43628 341 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 CLDN8P56748 225 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 FOXF2Q12947 444 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 BCL2A1Q16548 175 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 SMU1Q2TAY7 513 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 FBXL19-AS1Q494R0 122 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 HHATQ5VTY9 493 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 KIRREL3Q8IZU9 778 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 GCNT2Q8N0V5 402 aa15.15■□□□□ 0.02
CACNA1A-259ENST00000638114 MEIOBQ8N635 442 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms