RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 LRRC32Q14392 662 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 PARP16Q8N5Y8 322 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 FAM160A2Q8N612 972 aaPredicted RBP14.35□□□□□ -0.11
UBE3A-227ENST00000638011 RANGRFQ9HD47 186 aaPredicted RBP14.35□□□□□ -0.11
UBE3A-227ENST00000638011 UBIAD1Q9Y5Z9 338 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 DVL2O14641 736 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 SYNGR4O95473 234 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 CDKN2AIPNLQ96HQ2 116 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 A0A087WUU8 490 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 LRIT2A6NDA9 550 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 ANKRD66B4E2M5 251 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 PQBP1O60828 265 aaKnown RBP14.35□□□□□ -0.11
UBE3A-227ENST00000638011 TIGD3Q6B0B8 471 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 FAM163BP0C2L3 166 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 ECH1Q13011 328 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 BAMBIQ13145 260 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 YIF1BQ5BJH7 314 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 ATPAF1Q5TC12 328 aaPredicted RBP14.35□□□□□ -0.11
UBE3A-227ENST00000638011 CYS1Q717R9 158 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 UEVLDQ8IX04 471 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 OR9I1Q8NGQ6 314 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 JOSD2Q8TAC2 188 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 PCED1AQ9H1Q7 454 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 CACFD1Q9UGQ2 172 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 TCTE3Q8IZS6 198 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 OR1M1Q8NGA1 313 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.35□□□□□ -0.11
UBE3A-227ENST00000638011 PCDHB10Q9UN67 800 aa14.35□□□□□ -0.11
UBE3A-227ENST00000638011 VSTM2BA6NLU5 285 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 ARPC1BO15143 372 aaKnown RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 MSI1O43347 362 aaKnown RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 P2RX1P51575 399 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 CST9LP1Q5W188 147 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 TRMT2BQ96GJ1 504 aaKnown RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 TMEM82A0PJX8 343 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 UBE2Q2LH0YL09 131 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 MAS1P04201 325 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SMIM10L2AP0DMW4 78 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SMIM10L2BP0DMW5 78 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 PNMTP11086 282 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 RIN1Q13671 783 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 CLDN22Q8N7P3 220 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 OR9A1PQ8NGU1 263 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 PRAP1Q96NZ9 151 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SLC29A1Q99808 456 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 FER1L4A9Z1Z3 1794 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SHPRHQ149N8 1683 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SPATA31C1P0DKV0 1188 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SERPINA11Q86U17 422 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 ZNF611Q8N823 705 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 OR51B5Q9H339 312 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 COQ3Q9NZJ6 369 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 NDRG3Q9UGV2 375 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 NEURL4Q96JN8 1562 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 ALX3O95076 343 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 PCGF2P35227 344 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 TARBP2Q15633 366 aaKnown RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 NPAS4Q8IUM7 802 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 OR6K2Q8NGY2 324 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 ASB17Q8WXJ9 295 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 GATA6Q92908 595 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 UBL7Q96S82 380 aaPredicted RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 CRB3Q9BUF7 120 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 NTN4Q9HB63 628 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 KIAA2026Q5HYC2 2103 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 A0A0G2JLW4 131 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 MEIS2O14770 477 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 EMC8O43402 210 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 MRPL3P09001 348 aaKnown RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 CRABP1P29762 137 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 KDF1Q8NAX2 398 aaPredicted RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 NDNFQ8TB73 568 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 PSMG2Q969U7 264 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 PITX2Q99697 317 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 PUS1Q9Y606 427 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 STBD1O95210 358 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 C6orf47O95873 294 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 MMP7P09237 267 aaPredicted RBP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 FAM74A1Q5RGS3 127 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 IRF2BP1Q8IU81 584 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 OR51T1Q8NGJ9 327 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 OR5D16Q8NGK9 328 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SCARB1Q8WTV0 552 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SLC17A6Q9P2U8 582 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 NIPSNAP2O75323 286 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SLC43A1O75387 559 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 JTBO76095 146 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 TIA1P31483 386 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 HNRNPKP61978 463 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE3A-227ENST00000638011 ADAMTS16Q8TE57 1224 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 SMPDL3BQ92485 455 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 C14orf79Q96F83 325 aa14.34□□□□□ -0.11
UBE3A-227ENST00000638011 TAAR5O14804 337 aa14.33□□□□□ -0.11
UBE3A-227ENST00000638011 HLA-FP30511 346 aa14.33□□□□□ -0.11
UBE3A-227ENST00000638011 APOFQ13790 326 aa14.33□□□□□ -0.11
UBE3A-227ENST00000638011 MICAQ29983 383 aa14.33□□□□□ -0.11
UBE3A-227ENST00000638011 ABLIM2Q6H8Q1 611 aa14.33□□□□□ -0.11
UBE3A-227ENST00000638011 OR14C36Q8NHC7 312 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms