RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 FAM69BQ5VUD6 431 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 ULK3Q6PHR2 472 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 CROCCP3Q8IVE0 287 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 DND1Q8IYX4 353 aaKnown RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 FANK1Q8TC84 345 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 CPNE2Q96FN4 548 aaPredicted RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 ZNF764Q96H86 408 aaPredicted RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 LCORQ96JN0 433 aaPredicted RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 SORBS1Q9BX66 1292 aaKnown RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 TUBB1Q9H4B7 451 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 ZBTB20Q9HC78 741 aaPredicted RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 OLAHQ9NV23 265 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 ABCD2Q9UBJ2 740 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 TNFRSF10DQ9UBN6 386 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PRDM4Q9UKN5 801 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 TAF4O00268 1085 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PDCD5O14737 125 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PHYHO14832 338 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 LDB3O75112 727 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 ALOX12BO75342 701 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 HTR3BO95264 441 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 APOC1P02654 83 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PNLIPP16233 465 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 ZNF28P17035 718 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 TACR1P25103 407 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PRKAR1BP31321 381 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 METAP1P53582 386 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 RPS26P62854 115 aaKnown RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 PLAURQ03405 335 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 TMED1Q13445 227 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 MAPK14Q16539 360 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 KCTD21Q4G0X4 260 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 ARMC4Q5T2S8 1044 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 OGFRL1Q5TC84 451 aaPredicted RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 TRIQKQ629K1 86 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PGM2L1Q6PCE3 622 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 SMARCD3Q6STE5 483 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 CAMKMTQ7Z624 323 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 MORN4Q8NDC4 146 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PSD4Q8NDX1 1056 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 PROKR2Q8NFJ6 384 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 RAB2BQ8WUD1 216 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 SMPDL3BQ92485 455 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 TRIM63Q969Q1 353 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 SLC41A3Q96GZ6 507 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 SH3YL1Q96HL8 342 aaPredicted RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 OR51V1Q9H2C8 321 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 ARRDC1-AS1Q9H2J1 176 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 MCCC2Q9HCC0 563 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 NANSQ9NR45 359 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 TAS2R7Q9NYW3 318 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 BOKQ9UMX3 212 aaPredicted RBP5.17□□□□□ -1.58
CHD2-227ENST00000637572 WDR37Q9Y2I8 494 aa5.17□□□□□ -1.58
CHD2-227ENST00000637572 BAHCC1Q9P281 2608 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 CCDC187A0A096LP49 1063 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 LOC100506127A0A0U1RQW1 187 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 OTOL1A6NHN0 477 aaPredicted RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 SLC22A31A6NKX4 558 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 HMGB3O15347 200 aaKnown RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 SBK3P0C264 359 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 CRISP1P54107 249 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 CDH11P55287 796 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 TUBA3CQ13748 450 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 MLC1Q15049 377 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 ANKDD1AQ495B1 522 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 GTDC1Q4AE62 458 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 TMEM225Q6GV28 225 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 WBP2NLQ6ICG8 309 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 TSPYL5Q86VY4 417 aaPredicted RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 OR6N1Q8NGY5 312 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 NETO1Q8TDF5 533 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 ELP4Q96EB1 424 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 MND1Q9BWT6 205 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 POLDIP3Q9BY77 421 aaKnown RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 OR10A5Q9H207 317 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 CLEC4MQ9H2X3 399 aaPredicted RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 GPN2Q9H9Y4 310 aaPredicted RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 PLAC1Q9HBJ0 212 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 CD93Q9NPY3 652 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 STARD5Q9NSY2 213 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 TEX10Q9NXF1 929 aaPredicted RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 C5AR2Q9P296 337 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 C19orf53Q9UNZ5 99 aaPredicted RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 SLC6A5Q9Y345 797 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 SNX11Q9Y5W9 270 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 ZSWIM8A7E2V4 1837 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 WASHC1A8K0Z3 465 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 CENPBD1B2RD01 187 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 PGRMC2O15173 223 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 RRP8O43159 456 aaKnown RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 RFPL3O75679 317 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 ST6GAL1P15907 406 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 GRNP28799 593 aaKnown RBP5.16□□□□□ -1.58
CHD2-227ENST00000637572 OR1D4P47884 311 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 OR1E2P47887 323 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 ZNF84P51523 738 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 PCDH1Q08174 1060 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 RASGEF1BQ0VAM2 473 aa5.16□□□□□ -1.58
CHD2-227ENST00000637572 TRAM1Q15629 374 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms