RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MFSD12Q6NUT3 480 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 GCNT2Q8N0V5 402 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 FBXO30Q8TB52 745 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 C1GALT1C1Q96EU7 318 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 G6PC3Q9BUM1 346 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 CLEC4MQ9H2X3 399 aaPredicted RBP17.15■□□□□ 0.34
CLN6-221ENST00000637494 ZDHHC2Q9UIJ5 367 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 SNX8Q9Y5X2 465 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 PDZD2O15018 2839 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 SLC22A20A6NK97 555 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 C17orf51A8MQB3 221 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 H3BML4 177 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 SEC14L5O43304 696 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 HCRTR2O43614 444 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 TYROBPO43914 113 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 SOX30O94993 753 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 CRHP06850 196 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 KRT16P08779 473 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 ACP2P11117 423 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 PRPS1L1P21108 318 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 B3GALT5-AS1P59052 145 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 FOXF2Q12947 444 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLN6-221ENST00000637494 SPDYE7PQ495Y7 208 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 C6orf136Q5SQH8 315 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 IL23RQ5VWK5 629 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 LUZP2Q86TE4 346 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 EXOC3L1Q86VI1 746 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 OR7A2PQ8NGA2 310 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 OR5P2Q8WZ92 322 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 HOXB13Q92826 284 aaPredicted RBP17.14■□□□□ 0.33
CLN6-221ENST00000637494 GPATCH1Q9BRR8 931 aaKnown RBP17.14■□□□□ 0.33
CLN6-221ENST00000637494 C1orf50Q9BV19 199 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 PARD6BQ9BYG5 372 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 JKAMPQ9P055 326 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 GIMAP2Q9UG22 337 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 PACSIN3Q9UKS6 424 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 DCHS2Q6V1P9 2916 aa17.14■□□□□ 0.33
CLN6-221ENST00000637494 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 OR2M5A3KFT3 312 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 A6NNC1 897 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 SCDO00767 359 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 GMFGO60234 142 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 KCNK2O95069 426 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 SNUPNO95149 360 aaKnown RBP17.13■□□□□ 0.33
CLN6-221ENST00000637494 OXSR1O95747 527 aaPredicted RBP17.13■□□□□ 0.33
CLN6-221ENST00000637494 IGKV1D-16P01601 117 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 NGFRP08138 427 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 MYZAPP0CAP1 466 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 EPXP11678 715 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 CD1EP15812 388 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 CREB1P16220 341 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 EFNA1P20827 205 aaPredicted RBP17.13■□□□□ 0.33
CLN6-221ENST00000637494 ATP6V1C1P21283 382 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 TBXA2RP21731 343 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 MAP3K8P41279 467 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 POU6F2P78424 691 aaPredicted RBP17.13■□□□□ 0.33
CLN6-221ENST00000637494 FIGNL1Q6PIW4 674 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 CROCCP2Q86T23 111 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 MISPQ8IVT2 679 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 KIRREL3Q8IZU9 778 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 SLC16A11Q8NCK7 471 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 OR56A1Q8NGH5 318 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 SMPDL3BQ92485 455 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 MOAP1Q96BY2 351 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 FAM120BQ96EK7 910 aaKnown RBP17.13■□□□□ 0.33
CLN6-221ENST00000637494 GIMAP5Q96F15 307 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 ZIM3Q96PE6 472 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 YIPF4Q9BSR8 244 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 CENPHQ9H3R5 247 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 UBQLN4Q9NRR5 601 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 RASSF1Q9NS23 344 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 FAF1Q9UNN5 650 aaPredicted RBP17.13■□□□□ 0.33
CLN6-221ENST00000637494 ZNF337Q9Y3M9 751 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 AP4B1Q9Y6B7 739 aa17.13■□□□□ 0.33
CLN6-221ENST00000637494 A0A087WZY1 265 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 UQCRHLA0A096LP55 91 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 IGLV3-32A0A0A0MS00 114 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 WDR91A4D1P6 747 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 ALG1L2C9J202 215 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 TM9SF1O15321 606 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 BIRC5O15392 142 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 CFLARO15519 480 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 ZNF500O60304 480 aaPredicted RBP17.12■□□□□ 0.33
CLN6-221ENST00000637494 TNFRSF21O75509 655 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 GOSR1O95249 250 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 SERPINE1P05121 402 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 HMGN2P05204 90 aaKnown RBP17.12■□□□□ 0.33
CLN6-221ENST00000637494 TUBBP07437 444 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 LAMP1P11279 417 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 ETV4P43268 484 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 CCT3P49368 545 aaKnown RBP17.12■□□□□ 0.33
CLN6-221ENST00000637494 ZNF41P51814 821 aaPredicted RBP17.12■□□□□ 0.33
CLN6-221ENST00000637494 PTGR1Q14914 329 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 SGCBQ16585 318 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 DUSP5Q16690 384 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 GALNT10Q86SR1 603 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 CNEP1R1Q8N9A8 125 aa17.12■□□□□ 0.33
CLN6-221ENST00000637494 C3orf30Q96M34 536 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms