RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CPNE7Q9UBL6 633 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 C2orf72A6NCS6 295 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF878C9JN71 531 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 PRAMEF26H0Y7S4 382 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 J3KTA2 159 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 M0R3H8 397 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ARHGEF15O94989 841 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ANXA8P13928 327 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ADH7P40394 386 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ST3GAL4Q11206 333 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 PIN1Q13526 163 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 GPNMBQ14956 572 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 COX20Q5RI15 118 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 TPRG1LQ5T0D9 272 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 EEF1A1P5Q5VTE0 462 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF613Q6PF04 617 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 TMPPEQ6ZT21 453 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 OLIG3Q7RTU3 272 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DGLUCYQ7Z3D6 616 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF100Q8IYN0 542 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 RHOXF1Q8NHV9 184 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF675Q8TD23 568 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 TMEM41AQ96HV5 264 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 TMEM184CQ9NVA4 438 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ACTR10Q9NZ32 417 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 A0A1B0GW55 424 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 POM121BA6NF01 834 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 TMEM221A6NGB7 291 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 NPIPA2E9PIF3 369 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 NPIPA3F8WFD2 350 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 TP53I11O14683 189 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF821O75541 412 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 EGFP01133 1207 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DUX4L2P0CJ85 424 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DUX4L3P0CJ86 424 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DUX4L4P0CJ87 422 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DUX4L5P0CJ88 424 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DUX4L6P0CJ89 424 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DUX4L7P0CJ90 424 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ZNF3P17036 446 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ACVR1BP36896 505 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 RABIFP47224 123 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 FNTBP49356 437 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 RASGEF1BQ0VAM2 473 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 LIPJQ5W064 366 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 LRRC25Q8N386 305 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 OR56A1Q8NGH5 318 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 OR9A2Q8NGT5 310 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 OR4K13Q8NH42 304 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 EDAQ92838 391 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 NIPSNAP1Q9BPW8 284 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 ASPNQ9BXN1 380 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 FBXO8Q9NRD0 319 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 DUX4Q9UBX2 424 aa7.79□□□□□ -1.16
PTPDC1-204ENST00000620992 PROM1O43490 865 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 ABLIM3O94929 683 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 RPLP0P05388 317 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 TGM1P22735 817 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 VAMP1P23763 118 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 PYCR1P32322 319 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 SLC19A1P41440 591 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 NKX3-2P78367 333 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 KCNJ10P78508 379 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 MAP4K2Q12851 820 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 CCDC92Q53HC0 331 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 SPIN3Q5JUX0 258 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 LHX8Q68G74 356 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 ULK3Q6PHR2 472 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 TMED4Q7Z7H5 227 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 CNEP1R1Q8N9A8 125 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 OR8J2Q8NGG1 315 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 OR52P1PQ8NH57 321 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 APH1BQ8WW43 257 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 SLC6A18Q96N87 628 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 BCL7BQ9BQE9 202 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 RPP25Q9BUL9 199 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 RBM24Q9BX46 236 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 MVB12BQ9H7P6 319 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 SLAMF7Q9NQ25 335 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 MS4A12Q9NXJ0 267 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 TMPRSS11EQ9UL52 423 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 MUC6Q6W4X9 2439 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 ANTXRLA6NF34 631 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 GFRA2O00451 464 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 P04436 131 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 POU3F4P49335 361 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 VEZF1Q14119 521 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 CDKL4Q5MAI5 379 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 TCEAL6Q6IPX3 200 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 PNCKQ6P2M8 343 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 HTR3DQ70Z44 454 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 KANSL1Q7Z3B3 1105 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 ANKRD33Q7Z3H0 272 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 FAM83FQ8NEG4 500 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 WDR20Q8TBZ3 569 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 FBLIM1Q8WUP2 373 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 GGHQ92820 318 aa7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 TRMT2BQ96GJ1 504 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-204ENST00000620992 HRASLS5Q96KN8 279 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms