RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CLK3P49761 638 aaKnown RBP15.51■□□□□ 0.07
HMGN3-203ENST00000620514 TPD52P55327 224 aaPredicted RBP15.51■□□□□ 0.07
HMGN3-203ENST00000620514 CLDN15P56746 228 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 PRR5P85299 388 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 TESK1Q15569 626 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 BCL2A1Q16548 175 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 DUSP5Q16690 384 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 VPS26BQ4G0F5 336 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 FLYWCH1Q4VC44 716 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 ATP6AP1LQ52LC2 224 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 IL23RQ5VWK5 629 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 LRIG3Q6UXM1 1119 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 R3HCC1LQ7Z5L2 792 aaKnown RBP15.51■□□□□ 0.07
HMGN3-203ENST00000620514 GRAMD2AQ8IUY3 354 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 NUDCD3Q8IVD9 361 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 HOMEZQ8IX15 550 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 OR4C3Q8NH37 302 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 FAM120BQ96EK7 910 aaKnown RBP15.51■□□□□ 0.07
HMGN3-203ENST00000620514 FBXO34Q9NWN3 711 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 FOXD3Q9UJU5 478 aaPredicted RBP15.51■□□□□ 0.07
HMGN3-203ENST00000620514 ZNF337Q9Y3M9 751 aa15.51■□□□□ 0.07
HMGN3-203ENST00000620514 ANKHD1Q8IWZ3 2542 aaKnown RBP15.51■□□□□ 0.07
HMGN3-203ENST00000620514 IGLV3-32A0A0A0MS00 114 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 A0A1W2PRB8 838 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 OR2M5A3KFT3 312 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 SHISA8B8ZZ34 492 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 CTIFO43310 598 aaKnown RBP15.5■□□□□ 0.07
HMGN3-203ENST00000620514 ITM2AO43736 263 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 KCNK2O95069 426 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 OXSR1O95747 527 aaPredicted RBP15.5■□□□□ 0.07
HMGN3-203ENST00000620514 ALOX5P09917 674 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 PEPDP12955 493 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 PEX19P40855 299 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 SUCLG1P53597 346 aaKnown RBP15.5■□□□□ 0.07
HMGN3-203ENST00000620514 GANABQ14697 944 aaKnown RBP15.5■□□□□ 0.07
HMGN3-203ENST00000620514 EXOSC6Q5RKV6 272 aaKnown RBP15.5■□□□□ 0.07
HMGN3-203ENST00000620514 CCNJQ5T5M9 372 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 LUZP2Q86TE4 346 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 KRTCAP2Q8N6L1 136 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 GATSQ8NAP1 163 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 FNDC5Q8NAU1 212 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 LINC01560Q8TB33 94 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 FAM110BQ8TC76 370 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 FAM222BQ8WU58 562 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 TUBGCP3Q96CW5 907 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 ZFP3Q96NJ6 502 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 SFXN3Q9BWM7 321 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 POLDIP3Q9BY77 421 aaKnown RBP15.5■□□□□ 0.07
HMGN3-203ENST00000620514 PTGES2Q9H7Z7 377 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 ZCCHC3Q9NUD5 404 aaKnown RBP15.5■□□□□ 0.07
HMGN3-203ENST00000620514 MED12LQ86YW9 2145 aa15.5■□□□□ 0.07
HMGN3-203ENST00000620514 F8P00451 2351 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 H3BML4 177 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 RGS16O15492 202 aaPredicted RBP15.49■□□□□ 0.07
HMGN3-203ENST00000620514 SEC14L5O43304 696 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 ZNF500O60304 480 aaPredicted RBP15.49■□□□□ 0.07
HMGN3-203ENST00000620514 CLDN20P56880 219 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 C17orf67Q0P5P2 114 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 MLC1Q15049 377 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 CPTPQ5TA50 214 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 P4HA3Q7Z4N8 544 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 PPP1R14CQ8TAE6 165 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 FIG4Q92562 907 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 JADE3Q92613 823 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 RBM24Q9BX46 236 aaKnown RBP15.49■□□□□ 0.07
HMGN3-203ENST00000620514 LIME1Q9H400 295 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 RASSF1Q9NS23 344 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 SNX8Q9Y5X2 465 aa15.49■□□□□ 0.07
HMGN3-203ENST00000620514 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 A0A1W2PNV4 684 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 FAM221AA4D161 298 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 TUBAL3A6NHL2 446 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 A6NNC1 897 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 ALG1L2C9J202 215 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 TNFSF13O75888 250 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 HSPA4LO95757 839 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 HMGN2P05204 90 aaKnown RBP15.48■□□□□ 0.07
HMGN3-203ENST00000620514 TBXA2RP21731 343 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 DNAJA1P31689 397 aaKnown RBP15.48■□□□□ 0.07
HMGN3-203ENST00000620514 RPL3P39023 403 aaKnown RBP15.48■□□□□ 0.07
HMGN3-203ENST00000620514 PRIM2P49643 509 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 DIO3P55073 304 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 LASP1Q14847 261 aaKnown RBP15.48■□□□□ 0.07
HMGN3-203ENST00000620514 CHI3L2Q15782 390 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.48■□□□□ 0.07
HMGN3-203ENST00000620514 ZCCHC12Q6PEW1 402 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 CHMP1BQ7LBR1 199 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 KIF18BQ86Y91 864 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 MEIOBQ8N635 442 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 ZNF781Q8N8C0 355 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 COX18Q8N8Q8 333 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 OR5P2Q8WZ92 322 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 SMPDL3BQ92485 455 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 CDS1Q92903 461 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 CHMP6Q96FZ7 201 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 PPP1R36Q96LQ0 422 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 NPAS1Q99742 590 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 KLHDC3Q9BQ90 382 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 PIGQQ9BRB3 760 aa15.48■□□□□ 0.07
HMGN3-203ENST00000620514 CLEC4MQ9H2X3 399 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms