RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 HSD17B7P56937 341 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 ZNHIT3Q15649 155 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 SYT6Q5T7P8 510 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 CASP12Q6UXS9 341 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 OR1L3Q8NH93 324 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 TMEM255BQ8WV15 326 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 ARSGQ96EG1 525 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 VSTM2LQ96N03 204 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 DSN1Q9H410 356 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 EGLN3Q9H6Z9 239 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 DHCR7Q9UBM7 475 aaKnown RBP16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 ENPP5Q9UJA9 477 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 SLC7A7Q9UM01 511 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 ARID1BQ8NFD5 2236 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 UNC13CQ8NB66 2214 aa16.09■□□□□ 0.17
PCDHGC3-205ENST00000617641 CDHR4A6H8M9 788 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 ENTPD6O75354 484 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 HTR2AP28223 471 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 GPLD1P80108 840 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 OCA2Q04671 838 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 ST3GAL4Q11206 333 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 FLYWCH1Q4VC44 716 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 NPSR1Q6W5P4 371 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 RRM2BQ7LG56 351 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 STX19Q8N4C7 294 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 MAFAQ8NHW3 353 aaPredicted RBP16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 GNPDA2Q8TDQ7 276 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 ACOT11Q8WXI4 607 aaPredicted RBP16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 CCDC74AQ96AQ1 378 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 NUDT22Q9BRQ3 303 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 PLA2G12AQ9BZM1 189 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 DNAJC27Q9NZQ0 273 aa16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 MN1Q10571 1320 aaPredicted RBP16.08■□□□□ 0.17
PCDHGC3-205ENST00000617641 PIP5K1CO60331 668 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 GNSP15586 552 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 GSTM3P21266 225 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 HOXA6P31267 233 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 IFNGR2P38484 337 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 OMPP47874 163 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 EMP3P54852 163 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 SNRPGP62308 76 aaKnown RBP16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 PLAURQ03405 335 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 NFATC3Q12968 1075 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 GINS1Q14691 196 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 NR1D2Q14995 579 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 NNATQ16517 81 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 DECR1Q16698 335 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 PMS2CLQ68D20 193 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 RANBP3LQ86VV4 465 aaPredicted RBP16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 D2HGDHQ8N465 521 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 TCEANCQ8N8B7 351 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 PIGXQ8TBF5 258 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 POLE3Q9NRF9 147 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 LANCL2Q9NS86 450 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 TVP23BQ9NYZ1 205 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 RP1P56715 2156 aa16.08■□□□□ 0.16
PCDHGC3-205ENST00000617641 CACNA1EQ15878 2313 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 CCDC163A0A0D9SF12 145 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 SH3D21A4FU49 640 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 TSPAN31Q12999 210 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 PDZK1Q5T2W1 519 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 AP1ARQ63HQ0 302 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 ACSM5Q6NUN0 579 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 BCDIN3DQ7Z5W3 292 aaKnown RBP16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 C11orf74Q86VG3 221 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 ANKRD13BQ86YJ7 626 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 CARFQ8N187 725 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF614Q8N883 585 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 YIPF6Q96EC8 236 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 GPN2Q9H9Y4 310 aaPredicted RBP16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 PRAMEF2O60811 474 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 EPHA8P29322 1005 aaPredicted RBP16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 GIPRP48546 466 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 ST13P50502 369 aaKnown RBP16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 AQP6Q13520 282 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 UBE2UQ5VVX9 321 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 NRMQ8IXM6 262 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 C16orf52Q8NHV5 167 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 RNF31Q96EP0 1072 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 SLC41A2Q96JW4 573 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 OR10A5Q9H207 317 aa16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCDHGC3-205ENST00000617641 PRKYO43930 277 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 ADRA2AP08913 450 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 TDGF1P13385 188 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 ZNF182P17025 639 aaPredicted RBP16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 GPR4P46093 362 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 CDK5Q00535 292 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 FUT7Q11130 342 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 TBCEQ15813 527 aaPredicted RBP16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 MBOAT2Q6ZWT7 520 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 WDR5BQ86VZ2 330 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 RCBTB1Q8NDN9 531 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 OR8D4Q8NGM9 314 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 PMM1Q92871 262 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 PTCHD1Q96NR3 888 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 TAS2R16Q9NYV7 291 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 SEMA5BQ9P283 1151 aa16.06■□□□□ 0.16
PCDHGC3-205ENST00000617641 TRAPPC13A5PLN9 417 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms