RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.74□□□□□ -1.01
TARDBP-218ENST00000617172 GALNTL6Q49A17 601 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 ATP6AP1LQ52LC2 224 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 LUZP2Q86TE4 346 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 CDC20BQ86Y33 519 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 MISPQ8IVT2 679 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 OR2W6PQ8NHA6 318 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 FAM110BQ8TC76 370 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 TCP10LQ8TDR4 215 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 ACTRT2Q8TDY3 377 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 SLC9A6Q92581 669 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 CIDECQ96AQ7 238 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-218ENST00000617172 C1GALT1C1Q96EU7 318 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 SLC39A3Q9BRY0 314 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 YIPF4Q9BSR8 244 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 CXXC4Q9H2H0 198 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 EQTNQ9NQ60 294 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 UBQLN4Q9NRR5 601 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 ATAD3AQ9NVI7 634 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 PAQR5Q9NXK6 330 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-218ENST00000617172 ATP6V1HQ9UI12 483 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 ZNF337Q9Y3M9 751 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 PTGDR2Q9Y5Y4 395 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 CELSR1Q9NYQ6 3014 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 NCKAP5O14513 1909 aa8.74□□□□□ -1.01
TARDBP-218ENST00000617172 ANKHD1Q8IWZ3 2542 aaKnown RBP8.73□□□□□ -1.01
TARDBP-218ENST00000617172 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 A0A1W2PNV4 684 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 A0A1W2PRB8 838 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 GXYLT2A0PJZ3 443 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 B4DXG7 233 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 PIP5K1BO14986 540 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 PEX11AO75192 247 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 TNFSF13O75888 250 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 KCNK2O95069 426 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 TGM6O95932 706 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 KRT16P08779 473 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 ALOX5P09917 674 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 FCGR2AP12318 317 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 PRPS1L1P21108 318 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 VSNL1P62760 191 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 MAD2L1Q13257 205 aaPredicted RBP8.73□□□□□ -1.01
TARDBP-218ENST00000617172 SGCBQ16585 318 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 GRAMD1BQ3KR37 738 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 LSM12Q3MHD2 195 aaKnown RBP8.73□□□□□ -1.01
TARDBP-218ENST00000617172 ZNF385BQ569K4 471 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 ANKRD26P1Q6NSI1 321 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 MFSD12Q6NUT3 480 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 WDR93Q6P2C0 686 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 SZRD1Q7Z422 152 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 EXOC3L1Q86VI1 746 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 UBQLNLQ8IYU4 475 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 GCNT2Q8N0V5 402 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 SLC16A11Q8NCK7 471 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 OR4C3Q8NH37 302 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 LINC01560Q8TB33 94 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 SMPDL3BQ92485 455 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 PIK3R3Q92569 461 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 NRGNQ92686 78 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 MBD6Q96DN6 1003 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 STARD4Q96DR4 205 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 GIMAP5Q96F15 307 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 STACQ99469 402 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 TMEM109Q9BVC6 243 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 BTBD2Q9BX70 525 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 RTN4RQ9BZR6 473 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 DUSP22Q9NRW4 184 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 CCM2LQ9NUG4 571 aaPredicted RBP8.73□□□□□ -1.01
TARDBP-218ENST00000617172 GALNT8Q9NY28 637 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 ELOVL5Q9NYP7 299 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 FLRT3Q9NZU0 649 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 SLC17A7Q9P2U7 560 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 F8P00451 2351 aa8.73□□□□□ -1.01
TARDBP-218ENST00000617172 ANKRD17O75179 2603 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 A0A1W2PQD3 144 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 C7orf72A4D263 438 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SH3D21A4FU49 640 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 TMEM233B4DJY2 109 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 H3BML4 177 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SCDO00767 359 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SCAMP2O15127 329 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SPAG7O75391 227 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.012e-8■■■■■ 29.2
TARDBP-218ENST00000617172 SNUPNO95149 360 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SLU7O95391 586 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 OXSR1O95747 527 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 IGKV1D-16P01601 117 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 BPGMP07738 259 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 ZNF17P17021 662 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 TCEA1P23193 301 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 CCT3P49368 545 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SUCLG1P53597 346 aaKnown RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 CLDN15P56746 228 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 POU6F2P78424 691 aaPredicted RBP8.72□□□□□ -1.01
TARDBP-218ENST00000617172 DUSP5Q16690 384 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 TMEM44Q2T9K0 475 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 SMU1Q2TAY7 513 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 XKR7Q5GH72 579 aa8.72□□□□□ -1.01
TARDBP-218ENST00000617172 C6orf136Q5SQH8 315 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms