RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 DIO2Q92813 273 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NACC2Q96BF6 587 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 VMP1Q96GC9 406 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CNBD2Q96M20 576 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TAAR9Q96RI9 348 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CCNL2Q96S94 520 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MBOAT4Q96T53 435 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PITX2Q99697 317 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FNDC11Q9BVV2 318 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 OR8D2Q9GZM6 311 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TOR3AQ9H497 397 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZNF556Q9HAH1 456 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SMURF2Q9HAU4 748 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 APMAPQ9HDC9 416 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FAM118AQ9NWS6 357 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NCDNQ9UBB6 729 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SCOCQ9UIL1 159 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SLC35A3Q9Y2D2 325 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 DTX4Q9Y2E6 619 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 OR10H1Q9Y4A9 318 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CHST2Q9Y4C5 530 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 LOXL2Q9Y4K0 774 aa11.37□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CCDC187A0A096LP49 1063 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 C2orf92A0A1B0GVN3 265 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 A0A1W2PQD3 144 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SH3PXD2BA1X283 911 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TRIM64A6NGJ6 449 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 M0R3H8 397 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ABCB7O75027 752 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SEMA7AO75326 666 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 RAB40ALP0C0E4 278 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CCNYL3P0C7X3 344 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 RYKP34925 604 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 IFNGR2P38484 337 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ESRRGP62508 458 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TEKQ02763 1124 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 COX10Q12887 443 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KCNAB2Q13303 367 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 BLMHQ13867 455 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TRAM2Q15035 370 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NPTX1Q15818 432 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KCTD21Q4G0X4 260 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CCNJQ5T5M9 372 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MRPL2Q5T653 305 aaKnown RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HLA-DQA1Q5Y7H0 255 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZNF613Q6PF04 617 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FAM198BQ6UWH4 519 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZNF550Q7Z398 422 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SLCO6A1Q86UG4 719 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 LAPTM4BQ86VI4 370 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 COMTD1Q86VU5 262 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 LACC1Q8IV20 430 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 APLFQ8IW19 511 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HS3ST5Q8IZT8 346 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 C8orf59Q8N0T1 100 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NFAM1Q8NET5 270 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PRSS33Q8NF86 280 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 VANGL1Q8TAA9 524 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CYGBQ8WWM9 190 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SLC38A4Q969I6 547 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZG16BQ96DA0 208 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 LPAR4Q99677 370 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZNF559Q9BR84 538 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NUDT9Q9BW91 350 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ULBP3Q9BZM4 244 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 GRIP2Q9C0E4 1043 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 WWTR1Q9GZV5 400 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 QRSL1Q9H0R6 528 aaKnown RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HHATLQ9HCP6 504 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 KRCC1Q9NPI7 259 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 EXOSC3Q9NQT5 275 aaKnown RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PAPOLBQ9NRJ5 636 aaKnown RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 UBQLN4Q9NRR5 601 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 UBAP1Q9NZ09 502 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MAGED1Q9Y5V3 778 aaPredicted RBP11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 GPR179Q6PRD1 2367 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HEATR5AQ86XA9 2040 aa11.36□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 LOC100130705A0A1B0GUX0 176 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 HTR3EA5X5Y0 456 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 C4orf47A7E2U8 309 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 J3KTA2 159 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 DLGAP3O95886 979 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CCL4P13236 92 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NAGAP17050 411 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 GSTM3P21266 225 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TGM1P22735 817 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZNF136P52737 540 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 PNLIPRP2P54317 469 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NUP107P57740 925 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TAS2R41P59536 307 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ALDH6A1Q02252 535 aaKnown RBP11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 NCF4Q15080 339 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 MAPK14Q16539 360 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 ZNF691Q5VV52 312 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 FIGNL1Q6PIW4 674 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 RAB11FIP2Q7L804 512 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 CPEB2Q7Z5Q1 589 aaKnown RBP11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 TSPYL5Q86VY4 417 aaPredicted RBP11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 C9orf40Q8IXQ3 194 aa11.35□□□□□ -0.59
NEDD8-MDP1-203ENST00000604306 SLC34A3Q8N130 599 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms