RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 SAMHD1Q9Y3Z3 626 aaKnown RBP13.3□□□□□ -0.28
ZNF548-212ENST00000602086 OR10H1Q9Y4A9 318 aa13.3□□□□□ -0.28
ZNF548-212ENST00000602086 CHST2Q9Y4C5 530 aa13.3□□□□□ -0.28
ZNF548-212ENST00000602086 LYVE1Q9Y5Y7 322 aa13.3□□□□□ -0.28
ZNF548-212ENST00000602086 CACNA1GO43497 2377 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 FMO6PO60774 539 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 UGT2B17O75795 530 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 ALPLP05186 524 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 UMODP07911 640 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 UQCRBP14927 111 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 CD82P27701 267 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 ADH7P40394 386 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 OR1E2P47887 323 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 SLC26A5P58743 744 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 PPP2R2BQ00005 443 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 EPS8Q12929 822 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 TAF11Q15544 211 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 GPR68Q15743 365 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 RFX4Q33E94 735 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 FLYWCH1Q4VC44 716 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 FIGNL1Q6PIW4 674 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 IGF2-ASQ6U949 168 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 SHISA6Q6ZSJ9 500 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 OLIG3Q7RTU3 272 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 VRK2Q86Y07 508 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 C9orf40Q8IXQ3 194 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 PIK3C3Q8NEB9 887 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 OR4C15Q8NGM1 316 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 PHF10Q8WUB8 498 aaKnown RBP13.29□□□□□ -0.28
ZNF548-212ENST00000602086 SCNM1Q9BWG6 230 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 ZNF700Q9H0M5 742 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 NXF5Q9H1B4 397 aaKnown RBP13.29□□□□□ -0.28
ZNF548-212ENST00000602086 Q9H521 79 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 ANKRD19PQ9H560 264 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-212ENST00000602086 VNN3Q9NY84 501 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 LRCH1Q9Y2L9 728 aa13.29□□□□□ -0.28
ZNF548-212ENST00000602086 PTRH2Q9Y3E5 179 aaKnown RBP13.29□□□□□ -0.28
ZNF548-212ENST00000602086 KNTC1P50748 2209 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 CDHR4A6H8M9 788 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 C21orf140B9A014 251 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-212ENST00000602086 PDLIM1O00151 329 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 EI24O14681 340 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 DENRO43583 198 aaKnown RBP13.28□□□□□ -0.28
ZNF548-212ENST00000602086 IGKV1D-16P01601 117 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 NGFRP08138 427 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 TNFRSF1BP20333 461 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 ENDOUP21128 410 aaKnown RBP13.28□□□□□ -0.28
ZNF548-212ENST00000602086 MMP11P24347 488 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 RRM2P31350 389 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 FOLR3P41439 243 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 RNF4P78317 190 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 MAPK14Q16539 360 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 COLEC12Q5KU26 742 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 FAAH2Q6GMR7 532 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 FAM199XQ6PEV8 388 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-212ENST00000602086 HSDL2Q6YN16 418 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 ZNF836Q6ZNA1 936 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 TIPARPQ7Z3E1 657 aaKnown RBP13.28□□□□□ -0.28
ZNF548-212ENST00000602086 STK32CQ86UX6 486 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 SLC34A3Q8N130 599 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 GALNT4Q8N4A0 578 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 LINC00471Q8N535 108 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 TOR1AIP2Q8NFQ8 470 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 OR4N2Q8NGD1 307 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 OR4D11Q8NGI4 311 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 OR5L2Q8NGL0 311 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 DIO2Q92813 273 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 NAF1Q96HR8 494 aaKnown RBP13.28□□□□□ -0.28
ZNF548-212ENST00000602086 PRRC1Q96M27 445 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 GPR87Q9BY21 358 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 QRSL1Q9H0R6 528 aaKnown RBP13.28□□□□□ -0.28
ZNF548-212ENST00000602086 ACER3Q9NUN7 267 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 FBXO34Q9NWN3 711 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 KCNE5Q9UJ90 142 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 WASF3Q9UPY6 502 aa13.28□□□□□ -0.28
ZNF548-212ENST00000602086 A0A1W2PRQ8 180 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 C7orf72A4D263 438 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 DLGAP1O14490 977 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 DIRAS1O95057 198 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 OXSR1O95747 527 aaPredicted RBP13.27□□□□□ -0.29
ZNF548-212ENST00000602086 THRBP10828 461 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 NAGAP17050 411 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 IFNA8P32881 189 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 PNLIPRP2P54317 469 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 SPIBQ01892 262 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 TARDBPQ13148 414 aaKnown RBP eCLIP13.27□□□□□ -0.29
ZNF548-212ENST00000602086 DGCR6Q14129 220 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 FGFBP1Q14512 234 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 SSPNQ14714 243 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 PCOLCEQ15113 449 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 EXT1Q16394 746 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 NHSL2Q5HYW2 709 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 FAHD1Q6P587 224 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 TBPL2Q6SJ96 375 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 TMEM179BQ7Z7N9 219 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 ZAR1Q86SH2 424 aa13.27□□□□□ -0.29
ZNF548-212ENST00000602086 COMTD1Q86VU5 262 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms