RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SNTA1Q13424 505 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 SOWAHCQ53LP3 525 aaPredicted RBP20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 TYW3Q6IPR3 259 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 TMEM81Q6P7N7 255 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 LRRC74BQ6ZQY2 392 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 ARPINQ7Z6K5 226 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 MARCH3Q86UD3 253 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 CISD2Q8N5K1 135 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 ZNF527Q8NB42 609 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 GPATCH1Q9BRR8 931 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 TUBA8Q9NY65 449 aaPredicted RBP20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 CALML5Q9NZT1 146 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 RALYQ9UKM9 306 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 ABCG2Q9UNQ0 655 aa20.25■□□□□ 0.83
CHMP2A-204ENST00000597848 PINLYPA6NC86 204 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 CCT8L1PA6NM43 557 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 RFC3P40938 356 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 PTGDSP41222 190 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 CRISP3P54108 245 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 ATP12AP54707 1039 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 PSME3P61289 254 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 INAQ16352 499 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 FRRS1Q6ZNA5 592 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 ZNF619Q8N2I2 560 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 ZNF614Q8N883 585 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 POGLUT1Q8NBL1 392 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 NFKBIDQ8NI38 313 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 TMEM19Q96HH6 336 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 SDHAF3Q9NRP4 125 aa20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 BOKQ9UMX3 212 aaPredicted RBP20.24■□□□□ 0.83
CHMP2A-204ENST00000597848 ATMQ13315 3056 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 B2RBV5 119 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 GNB5O14775 395 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 SORBS2O94875 1100 aaKnown RBP20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 ZIC2O95409 532 aaPredicted RBP20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 PRB1P04280 392 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 NGFRP08138 427 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 GUSBP08236 651 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 ARAFP10398 606 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 CALB2P22676 271 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 CDK6Q00534 326 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 MAPK11Q15759 364 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 ZNF630Q2M218 657 aaPredicted RBP20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 SERPINA11Q86U17 422 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 GATSQ8NAP1 163 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 ZNF597Q96LX8 424 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 TAAR6Q96RI8 345 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 SAP130Q9H0E3 1048 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 SLC38A1Q9H2H9 487 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 TMEM38AQ9H6F2 299 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 RUBCNLQ9H714 662 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 MTHFD2LQ9H903 347 aaPredicted RBP20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 AP3M1Q9Y2T2 418 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 WIF1Q9Y5W5 379 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 TLN1Q9Y490 2541 aaKnown RBP20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 NBEAQ8NFP9 2946 aa20.23■□□□□ 0.83
CHMP2A-204ENST00000597848 ALG1L2C9J202 215 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 NDUFB5O43674 189 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 KIAA0513O60268 411 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 TRIM3O75382 744 aaPredicted RBP20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 UBOX5O94941 541 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 ANGPTL1O95841 491 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 RNF144AP50876 292 aaPredicted RBP20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 SLC7A2P52569 658 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 SCARB2Q14108 478 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 ADRM1Q16186 407 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 RPS26P11Q5JNZ5 115 aaPredicted RBP20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 FAM180AQ6UWF9 173 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 APOOLQ6UXV4 268 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 HMGN2P46Q86SG4 172 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 SLC15A3Q8IY34 581 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 METTL25Q8N6Q8 603 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 ZFP62Q8NB50 900 aaPredicted RBP20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 C11orf65Q8NCR3 313 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 FBXO27Q8NI29 283 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 RNF138Q8WVD3 245 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 TMEM41AQ96HV5 264 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 TREX2Q9BQ50 279 aaPredicted RBP20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 CACYBPQ9HB71 228 aaKnown RBP20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 ZFP64Q9NPA5 681 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 CMTM6Q9NX76 183 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 PPP4R1LQ9P1A2 415 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 DTNAQ9Y4J8 743 aa20.22■□□□□ 0.83
CHMP2A-204ENST00000597848 A0A0G2JPF8 293 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 HNRNPCL2B2RXH8 293 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 HNRNPCL3B7ZW38 293 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 NPIPB9F8W1W9 429 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 H3BNH8 94 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 HNRNPCL1O60812 293 aaKnown RBP20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 CRYABP02511 175 aaKnown RBP20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 HNRNPCL4P0DMR1 293 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 T-ENOLP0DO92 83 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 GAS1P54826 345 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 SLC25A3Q00325 362 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 RBBP4Q09028 425 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 INPP5JQ15735 1006 aaPredicted RBP20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 ZNF141Q15928 474 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 KLHL26Q53HC5 615 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 PDZK1Q5T2W1 519 aa20.21■□□□□ 0.83
CHMP2A-204ENST00000597848 OR5M10Q6IEU7 315 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms