RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 WSB2Q9NYS7 404 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-202ENST00000594814 UBQLN1Q9UMX0 589 aaKnown RBP4.12□□□□□ -1.75
LRIT3-202ENST00000594814 NDRG2Q9UN36 371 aaKnown RBP4.12□□□□□ -1.75
LRIT3-202ENST00000594814 PCDHB10Q9UN67 800 aa4.12□□□□□ -1.75
LRIT3-202ENST00000594814 HIF3AQ9Y2N7 669 aa4.12□□□□□ -1.75
LRIT3-202ENST00000594814 KCNIP3Q9Y2W7 256 aa4.12□□□□□ -1.75
LRIT3-202ENST00000594814 POLR3HQ9Y535 204 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-202ENST00000594814 PCDHB9Q9Y5E1 797 aa4.12□□□□□ -1.75
LRIT3-202ENST00000594814 TIMM13Q9Y5L4 95 aaPredicted RBP4.12□□□□□ -1.75
LRIT3-202ENST00000594814 CELSR3Q9NYQ7 3312 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SMIM28A0A1B0GU29 152 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 A0A1W2PPC1 479 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 A0A1W2PRB8 838 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 RFPL4AA6NLU0 287 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ZNF879B4DU55 563 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 RFPL4AL1F8VTS6 287 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 NRG2O14511 850 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 NOBOXO60393 691 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 GALR3O60755 368 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 BEST1O76090 585 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 HLA-DPB1P04440 258 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 HIST1H2ABP04908 130 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 CLEC2LP0C7M8 214 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 GKN3PP0CG01 181 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 PF4V1P10720 104 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 FDXRP22570 491 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 PTPN6P29350 595 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 MAPK9P45984 424 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 CLDN8P56748 225 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SMIM11AP58511 58 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SNRPD2P62316 118 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ZFP36L1Q07352 338 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SRSF4Q08170 494 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SPOCK1Q08629 439 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 TMEM115Q12893 351 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 KIAA0040Q15053 153 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SSX1Q16384 188 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 GSG1Q2KHT4 349 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 PAN3Q58A45 887 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 COL13A1Q5TAT6 717 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 PAMR1Q6UXH9 720 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 NPNTQ6UXI9 565 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 HIST3H2AQ7L7L0 130 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 TAS1R1Q7RTX1 841 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ANKRD46Q86W74 232 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 GPR26Q8NDV2 337 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 OR1S1Q8NH92 325 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 DNAJB14Q8TBM8 379 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 LCN9Q8WX39 176 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ACOT11Q8WXI4 607 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 EDEM1Q92611 657 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 HIST1H2ACQ93077 130 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ACSF2Q96CM8 615 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 P2RY11Q96G91 374 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 TMEM176AQ96HP8 235 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 LRFN5Q96NI6 719 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 KCNS3Q9BQ31 491 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 MRPL45Q9BRJ2 306 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 BARHL1Q9BZE3 327 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SEMA4CQ9C0C4 833 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 PCED1AQ9H1Q7 454 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 MFSD1Q9H3U5 465 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 MTG2Q9H4K7 406 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 BCO1Q9HAY6 547 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ZNF358Q9NW07 568 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 GFOD1Q9NXC2 390 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 THUMPD1Q9NXG2 353 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 RASL12Q9NYN1 266 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SAE1Q9UBE0 346 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ZNF222Q9UK12 451 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 OGDHLQ9ULD0 1010 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 KAT6AQ92794 2004 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ELOA3CA0A087WX78 387 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 TEX13CA0A0J9YWL9 993 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 CIB4A0PJX0 185 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 METTL21EPA6NDL7 271 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 OR6C75A6NL08 312 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 LRRTM2O43300 516 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 RGS14O43566 566 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 DNAJB6O75190 326 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 GGCTO75223 188 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 PAGE1O75459 146 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ADAP00813 363 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 MT-ND4LP03901 98 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 HOXB9P17482 250 aaPredicted RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 C5AR1P21730 350 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 CAPZA1P52907 286 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 EPHB3P54753 998 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SCAND1P57086 179 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 PKIAP61925 76 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 MRPS6P82932 125 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 RPL6Q02878 288 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SSBP1Q04837 148 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 IL10RBQ08334 325 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 ITKQ08881 620 aa4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SRSF5Q13243 272 aaKnown RBP4.11□□□□□ -1.75
LRIT3-202ENST00000594814 SNAPC1Q16533 368 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms