RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TMEM45AQ9NWC5 275 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 KLRF1Q9NZS2 232 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 JKAMPQ9P055 326 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 PRODH2Q9UF12 536 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 HAO1Q9UJM8 370 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 MAPRE3Q9UPY8 281 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 RPH3AQ9Y2J0 694 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 TMA7Q9Y2S6 64 aaKnown RBP8.59□□□□□ -1.03
BRCA1-226ENST00000591534 SLC6A5Q9Y345 797 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 USH1CQ9Y6N9 552 aa8.59□□□□□ -1.03
BRCA1-226ENST00000591534 ANKHD1Q8IWZ3 2542 aaKnown RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF407Q9C0G0 2248 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 A0A1B0GTL3 188 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 WDR91A4D1P6 747 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 SH3D21A4FU49 640 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 A8MT66 165 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 HDAC3O15379 428 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 TMPRSS11DO60235 418 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 DLX3O60479 287 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 PRKRAO75569 313 aaKnown RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 BCAS2O75934 225 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 RCBTB2O95199 551 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 KRT6AP02538 564 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 KRT6BP04259 564 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ABCB1P08183 1280 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 FGF4P08620 206 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 INHBBP09529 407 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 CPMP14384 443 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 CREB1P16220 341 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 CSNK2A2P19784 350 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 BGNP21810 368 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 PTPN6P29350 595 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 KRT20P35900 424 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 KRT6CP48668 564 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 CCNG1P51959 295 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 MAPK12P53778 367 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 NKX6-1P78426 367 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 LTBQ06643 244 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 PLCXD2Q0VAA5 305 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 BST1Q10588 318 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 MAD2L1Q13257 205 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 EIPR1Q53HC9 387 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 SH2D4BQ5SQS7 431 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF678Q5SXM1 525 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 CCNYL2Q5T2Q4 361 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 FRG2Q64ET8 278 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 OR2A2Q6IF42 318 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 POMZP3Q6PJE2 187 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ANGPTL8Q6UXH0 198 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 TMEM64Q6YI46 380 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 RNF165Q6ZSG1 346 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 GOLGA7Q7Z5G4 137 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 P3H2Q8IVL5 708 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF615Q8N8J6 731 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 PTGR2Q8N8N7 351 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 FAM83FQ8NEG4 500 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 TRPC4APQ8TEL6 797 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 DOK4Q8TEW6 326 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 PIGTQ969N2 578 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ADIPOR1Q96A54 375 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 LCORQ96JN0 433 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 FRG2BQ96QU4 278 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF382Q96SR6 550 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 FAIM2Q9BWQ8 316 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 OSBPL11Q9BXB4 747 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 PLEKHF2Q9H8W4 249 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF226Q9NYT6 803 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 BCAP29Q9UHQ4 241 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 PFDN2Q9UHV9 154 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 EMCNQ9ULC0 261 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 SNX6Q9UNH7 406 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 EXO1Q9UQ84 846 aaKnown RBP8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF780BQ9Y6R6 833 aa8.58□□□□□ -1.04
BRCA1-226ENST00000591534 ABCA4P78363 2273 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 DNAJC13O75165 2243 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 LOC100996750A0A140TA64 210 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 C1orf226A1L170 272 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 PPP6CO00743 305 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 PGRMC2O15173 223 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 SLC22A2O15244 555 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 SNX3O60493 162 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 ICOSLGO75144 302 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 ESRRBO95718 433 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 CLPSP04118 112 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 ATP1B1P05026 303 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 CRHP06850 196 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 KLK1P06870 262 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 UROSP10746 265 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 FPR1P21462 350 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 HOXC12P31275 282 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 PCYT1AP49585 367 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 NEK2P51955 445 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 AGFG1P52594 562 aaKnown RBP8.57□□□□□ -1.04
BRCA1-226ENST00000591534 ARFIP2P53365 341 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 WNT3P56703 355 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 EEFSECP57772 596 aaKnown RBP8.57□□□□□ -1.04
BRCA1-226ENST00000591534 MRPS22P82650 360 aaKnown RBP8.57□□□□□ -1.04
BRCA1-226ENST00000591534 OCRLQ01968 901 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 MAP4K2Q12851 820 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 FGFBP1Q14512 234 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms