RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CHST10O43529 356 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PRICKLE3O43900 615 aaPredicted RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 EIF1BO60739 113 aaKnown RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MTX2O75431 263 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 RHOQP17081 205 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MMP11P24347 488 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 EIF1P41567 113 aaKnown RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PTGER3P43115 390 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PRMT2P55345 433 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 SEC61A1P61619 476 aaKnown RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 IRF8Q02556 426 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 TAP2Q03519 686 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 ILKQ13418 452 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 TGIF1Q15583 401 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 LRRC37A5PQ49AS3 106 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 TCTN3Q6NUS6 607 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 LRRC28Q86X40 367 aaPredicted RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 TEX47Q8TBZ9 253 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 CHTF18Q8WVB6 975 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MTG2Q9H4K7 406 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 MED20Q9H944 212 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 RNF186Q9NXI6 227 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 C5AR2Q9P296 337 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 KLK11Q9UBX7 282 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
CIRBP-228ENST00000590347 TRPV2Q9Y5S1 764 aa14.24□□□□□ -0.13
CIRBP-228ENST00000590347 ANHXE9PGG2 379 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 KCNAB3O43448 404 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 FRS3O43559 492 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 ICOSLGO75144 302 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 S100A9P06702 114 aaKnown RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 ANXA5P08758 320 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 GRK4P32298 578 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 GDNFP39905 211 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 RBM39Q14498 530 aaKnown RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 DCAF12L2Q5VW00 463 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 SEZ6L2Q6UXD5 910 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 BTN2A1Q7KYR7 527 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 COMTD1Q86VU5 262 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 PXT1Q8NFP0 134 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 HAVCR2Q8TDQ0 301 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 ARMC5Q96C12 935 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 ZNF75AQ96N20 296 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 GPBP1L1Q9HC44 474 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 PTTG3PQ9NZH4 202 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 GHRLQ9UBU3 117 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 DENND4AQ7Z401 1863 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 PDCD11Q14690 1871 aaKnown RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 E9PI62 339 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 SCAMP2O15127 329 aaKnown RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 SLC16A1P53985 500 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 GAS1P54826 345 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 RPS24P62847 133 aaKnown RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 ZNF155Q12901 538 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 PYHIN1Q6K0P9 492 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 SFXN4Q6P4A7 337 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 PODNL1Q6PEZ8 512 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 UBE2R2Q712K3 238 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 JAZF1Q86VZ6 243 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 ZBTB2Q8N680 514 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 TEX26Q8N6G2 289 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 PLA2G15Q8NCC3 412 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 FBXO15Q8NCQ5 510 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 RXFP4Q8TDU9 374 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 TCEAL3Q969E4 200 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 C10orf90Q96M02 699 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 TM6SF2Q9BZW4 377 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 SLC32A1Q9H598 525 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 FAM120CQ9NX05 1096 aaKnown RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 CXXC1Q9P0U4 656 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-228ENST00000590347 NDRG3Q9UGV2 375 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 PTCH2Q9Y6C5 1203 aa14.23□□□□□ -0.13
CIRBP-228ENST00000590347 CDH23Q9H251 3354 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 ANKRD66B4E2M5 251 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 STK25O00506 426 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 CDH11P55287 796 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 SRSF3P84103 164 aaKnown RBP14.22□□□□□ -0.13
CIRBP-228ENST00000590347 SORDQ00796 357 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 EOGTQ5NDL2 527 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 OR7E24Q6IFN5 339 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 C16orf59Q7L2K0 433 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 HSD17B13Q7Z5P4 300 aaPredicted RBP14.22□□□□□ -0.13
CIRBP-228ENST00000590347 VRK3Q8IV63 474 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 DMRTC2Q8IXT2 367 aaPredicted RBP14.22□□□□□ -0.13
CIRBP-228ENST00000590347 ZNF614Q8N883 585 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 GPR32P1Q8NGA4 272 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 THAP6Q8TBB0 222 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 UROC1Q96N76 676 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 WRAP53Q9BUR4 548 aaKnown RBP14.22□□□□□ -0.13
CIRBP-228ENST00000590347 P2RY12Q9H244 342 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 ASH2LQ9UBL3 628 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 VPS29Q9UBQ0 182 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 DSPPQ9NZW4 1301 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 A0A1B0GV90 55 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 EFCAB7A8K855 629 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 WASH4PA8MWX3 477 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 SCAMP1O15126 338 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 BNIP3LO60238 219 aa14.22□□□□□ -0.13
CIRBP-228ENST00000590347 H1F0P07305 194 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms