RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SEM1Q6ZVN7 128 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 CHMP1BQ7LBR1 199 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 LIX1LQ8IVB5 337 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 VPS37AQ8NEZ2 397 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 OR4C3Q8NH37 302 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 OR5AK3PQ8NH89 298 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 RNF138Q8WVD3 245 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 CDS1Q92903 461 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 G6PC3Q9BUM1 346 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 BTBD2Q9BX70 525 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 ACTRT3Q9BYD9 372 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 RTN4RQ9BZR6 473 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 PIGUQ9H490 435 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 MEAF6Q9HAF1 191 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 FBXO34Q9NWN3 711 aa10.97□□□□□ -0.65
TPM4-212ENST00000590180 MRPS18CQ9Y3D5 142 aaKnown RBP10.97□□□□□ -0.65
TPM4-212ENST00000590180 TRPC5OSA6NMA1 111 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 KDM4EB2RXH2 506 aaPredicted RBP10.96□□□□□ -0.65
TPM4-212ENST00000590180 HDAC3O15379 428 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 NDUFB5O43674 189 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 KRT16P08779 473 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 PRF1P14222 555 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 CPN1P15169 458 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 ATP6V1C1P21283 382 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 C21orf58P58505 322 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 HBA1P69905 142 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 ANXA8L1Q5VT79 327 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 NSUN5P2Q63ZY6 315 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 NXNQ6DKJ4 435 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 CDC73Q6P1J9 531 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 BHLHB9Q6PI77 547 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 APOOLQ6UXV4 268 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 C6orf120Q7Z4R8 191 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 SPATA19Q7Z5L4 167 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 LACC1Q8IV20 430 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 WDR75Q8IWA0 830 aaKnown RBP10.96□□□□□ -0.65
TPM4-212ENST00000590180 CLECL1Q8IZS7 167 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 CLEC4FQ8N1N0 589 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 FADS6Q8N9I5 356 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 GATSQ8NAP1 163 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 TNIP2Q8NFZ5 429 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 OR4A15Q8NGL6 344 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 OR5M1Q8NGP8 315 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 PSMA8Q8TAA3 256 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 FAM110BQ8TC76 370 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 ZPLD1Q8TCW7 415 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 MOAP1Q96BY2 351 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 STACQ99469 402 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 SPOCK3Q9BQ16 436 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 WDR55Q9H6Y2 383 aaPredicted RBP10.96□□□□□ -0.65
TPM4-212ENST00000590180 CALHM2Q9HA72 323 aa10.96□□□□□ -0.65
TPM4-212ENST00000590180 PRSS51A0A1B0GVH4 220 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 SLCO1B7G3V0H7 640 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 SCDO00767 359 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 SDHDO14521 159 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 DVL2O14641 736 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 SNNO75324 88 aaPredicted RBP10.95□□□□□ -0.66
TPM4-212ENST00000590180 SOX30O94993 753 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 OXSR1O95747 527 aaPredicted RBP10.95□□□□□ -0.66
TPM4-212ENST00000590180 TBXA2RP21731 343 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 MATN1P21941 496 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 BMP5P22003 454 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 CHMP24386 653 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 EPHA3P29320 983 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 CEACAM8P31997 349 aaPredicted RBP10.95□□□□□ -0.66
TPM4-212ENST00000590180 S100A3P33764 101 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 TIMP3P35625 211 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 AGFG1P52594 562 aaKnown RBP10.95□□□□□ -0.66
TPM4-212ENST00000590180 DGKQP52824 942 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 CLNS1AP54105 237 aaKnown RBP10.95□□□□□ -0.66
TPM4-212ENST00000590180 GFRA1P56159 465 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.95□□□□□ -0.66
TPM4-212ENST00000590180 SLC25A35Q3KQZ1 300 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 RAET1LQ5VY80 246 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 HDXQ7Z353 690 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 CAMKMTQ7Z624 323 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 ZAR1Q86SH2 424 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 ANKRD46Q86W74 232 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 UBQLNLQ8IYU4 475 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 LRRC34Q8IZ02 419 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 GOLGA6L1Q8N7Z2 621 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 RAB3IL1Q8TBN0 382 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 SFXN5Q8TD22 340 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 ZNF75CPQ92670 426 aaPredicted RBP10.95□□□□□ -0.66
TPM4-212ENST00000590180 TUBA1CQ9BQE3 449 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 ENKD1Q9H0I2 346 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 NEUROD4Q9HD90 331 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 UBQLN4Q9NRR5 601 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 DUSP22Q9NRW4 184 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 GPATCH2Q9NW75 528 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 ARGLU1Q9NWB6 273 aaPredicted RBP10.95□□□□□ -0.66
TPM4-212ENST00000590180 GIN1Q9NXP7 522 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 KCNE3Q9Y6H6 103 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 CELSR2Q9HCU4 2923 aa10.95□□□□□ -0.66
TPM4-212ENST00000590180 PCNX3Q9H6A9 2034 aa10.94□□□□□ -0.66
TPM4-212ENST00000590180 CD8B2A6NJW9 211 aa10.94□□□□□ -0.66
TPM4-212ENST00000590180 B4DXG7 233 aa10.94□□□□□ -0.66
TPM4-212ENST00000590180 ALG1L2C9J202 215 aa10.94□□□□□ -0.66
TPM4-212ENST00000590180 RNASET2O00584 256 aaKnown RBP10.94□□□□□ -0.66
TPM4-212ENST00000590180 PEPDP12955 493 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms