RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GMNNO75496 209 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 UGT2B17O75795 530 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 NEURL1O76050 574 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 OXSR1O95747 527 aaPredicted RBP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 NGFRP08138 427 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 FAM87AP0C7U9 286 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 CCL3P10147 92 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ETS2P15036 469 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 HPGDP15428 266 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 TBXA2RP21731 343 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 EVI2BP34910 448 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ATP12AP54707 1039 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 PCBP3P57721 371 aaKnown RBP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF141Q15928 474 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 MDGA2Q7Z553 956 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 PATL1Q86TB9 770 aaKnown RBP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 KRT73Q86Y46 540 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 PEX5LQ8IYB4 626 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 FBXW8Q8N3Y1 598 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ZADH2Q8N4Q0 377 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 PSD4Q8NDX1 1056 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 MDS2Q8NDY4 140 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 OIT3Q8WWZ8 545 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 FIG4Q92562 907 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ZG16BQ96DA0 208 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF607Q96SK3 696 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 QRSL1Q9H0R6 528 aaKnown RBP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ADNPQ9H2P0 1102 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 MMADHCQ9H3L0 296 aaPredicted RBP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 METTL7AQ9H8H3 244 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 CACYBPQ9HB71 228 aaKnown RBP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 CNIH4Q9P003 139 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 SUCOQ9UBS9 1254 aaKnown RBP13.93□□□□□ -0.18
ATG4D-211ENST00000589753 EGFL7Q9UHF1 273 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 KCNE5Q9UJ90 142 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 ABCG2Q9UNQ0 655 aa13.93□□□□□ -0.18
ATG4D-211ENST00000589753 CHD8Q9HCK8 2581 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 PRAMEF25A6NGN4 478 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 AGAP5A6NIR3 686 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 K7EM74 188 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 FADS1O60427 444 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 GCM2O75603 506 aaPredicted RBP13.92□□□□□ -0.18
ATG4D-211ENST00000589753 SERPINB7O75635 380 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 SLC25A12O75746 678 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 PDE9AO76083 593 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 PDGFAP04085 211 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 P04436 131 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 CD46P15529 392 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 GGT1P19440 569 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 MSX2P35548 267 aaPredicted RBP13.92□□□□□ -0.18
ATG4D-211ENST00000589753 CLK3P49761 638 aaKnown RBP13.92□□□□□ -0.18
ATG4D-211ENST00000589753 TNFSF10P50591 281 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 BNIP2Q12982 314 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 FXNQ16595 210 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 PDZK1Q5T2W1 519 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 TMEM81Q6P7N7 255 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 PGM2L1Q6PCE3 622 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 CCDC80Q76M96 950 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 HMGN2P46Q86SG4 172 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 PTRH1Q86Y79 214 aaKnown RBP13.92□□□□□ -0.18
ATG4D-211ENST00000589753 HPS6Q86YV9 775 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 ULK2Q8IYT8 1036 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF614Q8N883 585 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 POGLUT1Q8NBL1 392 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 CATSPER1Q8NEC5 780 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 OR52P1PQ8NH57 321 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 C9orf43Q8TAL5 461 aaPredicted RBP13.92□□□□□ -0.18
ATG4D-211ENST00000589753 GRHL3Q8TE85 626 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 RNF138Q8WVD3 245 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 C5orf34Q96MH7 638 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 SPATA5L1Q9BVQ7 753 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 TBL1XR1Q9BZK7 514 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 SACM1LQ9NTJ5 587 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 KLRF1Q9NZS2 232 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 CNOT11Q9UKZ1 510 aaKnown RBP13.92□□□□□ -0.18
ATG4D-211ENST00000589753 TP53TG5Q9Y2B4 290 aa13.92□□□□□ -0.18
ATG4D-211ENST00000589753 GPC6Q9Y625 555 aaPredicted RBP13.92□□□□□ -0.18
ATG4D-211ENST00000589753 PTPRQQ9UMZ3 2332 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 CENPVL1A0A0U1RR11 272 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 A0A1W2PQD3 144 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 ERICH4A6NGS2 130 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 ALG1L2C9J202 215 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 M0QX08 132 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 RRP9O43818 475 aaKnown RBP13.91□□□□□ -0.18
ATG4D-211ENST00000589753 SORBS2O94875 1100 aaKnown RBP13.91□□□□□ -0.18
ATG4D-211ENST00000589753 DBIP07108 87 aaKnown RBP13.91□□□□□ -0.18
ATG4D-211ENST00000589753 NCK1P16333 377 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 IL7RP16871 459 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
ATG4D-211ENST00000589753 KDELR2P33947 212 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 CASP3P42574 277 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 CD97P48960 835 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 SNTA1Q13424 505 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 MAPK14Q16539 360 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 KLHL26Q53HC5 615 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 TBCELQ5QJ74 424 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 PRAMEF20Q5VT98 475 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 BICRALQ6AI39 1079 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms