RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DECR1Q16698 335 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 SH2D5Q6ZV89 423 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 PLEKHM3Q6ZWE6 761 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 CXXC5Q7LFL8 322 aaKnown RBP16.5■□□□□ 0.23
CCDC43-204ENST00000588687 GFM2Q969S9 779 aaKnown RBP16.5■□□□□ 0.23
CCDC43-204ENST00000588687 L3HYPDHQ96EM0 354 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 AMDHD1Q96NU7 426 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 BBS4Q96RK4 519 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 PTGES2Q9H7Z7 377 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 MYNNQ9NPC7 610 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 SDHAF3Q9NRP4 125 aa16.5■□□□□ 0.23
CCDC43-204ENST00000588687 POC1B-GALNT4F8VUJ3 575 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 UBFD1O14562 309 aaKnown RBP16.49■□□□□ 0.23
CCDC43-204ENST00000588687 UTS2O95399 124 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 ENO1P06733 434 aaKnown RBP16.49■□□□□ 0.23
CCDC43-204ENST00000588687 IFI6P09912 130 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 NID1P14543 1247 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 PPP3CBP16298 524 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 ZNF17P17021 662 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 IL11P20809 199 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 IMPDH1P20839 514 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 PSMA4P25789 261 aaKnown RBP16.49■□□□□ 0.23
CCDC43-204ENST00000588687 PRKAA2P54646 552 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 PKNOX1P55347 436 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 RPS3AP61247 264 aaKnown RBP16.49■□□□□ 0.23
CCDC43-204ENST00000588687 ZNF844Q08AG5 666 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 EXOC3L2Q2M3D2 409 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 TIFABQ6ZNK6 161 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 ELP4Q96EB1 424 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 GMPPAQ96IJ6 420 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-204ENST00000588687 KLHDC3Q9BQ90 382 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 GSTO2Q9H4Y5 243 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 Q9N2J8 555 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 DDX18Q9NVP1 670 aaKnown RBP16.49■□□□□ 0.23
CCDC43-204ENST00000588687 GRID1Q9ULK0 1009 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 CLEC4AQ9UMR7 237 aa16.49■□□□□ 0.23
CCDC43-204ENST00000588687 GXYLT2A0PJZ3 443 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 TMCC2O75069 709 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 ANGPTL1O95841 491 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 SNRPAP09012 282 aaKnown RBP16.48■□□□□ 0.23
CCDC43-204ENST00000588687 ATP5F1P24539 256 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-204ENST00000588687 GRAMD1BQ3KR37 738 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 TEX35Q5T0J7 233 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 LGSNQ5TDP6 509 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 ZNF611Q8N823 705 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 OR10D3Q8NH80 312 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 FMO2Q99518 471 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 EMC9Q9Y3B6 208 aa16.48■□□□□ 0.23
CCDC43-204ENST00000588687 C7orf72A4D263 438 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 EIF1AYO14602 144 aaKnown RBP16.47■□□□□ 0.23
CCDC43-204ENST00000588687 HS3ST1O14792 307 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 TAC1P20366 129 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 EIF1AXP47813 144 aaKnown RBP16.47■□□□□ 0.23
CCDC43-204ENST00000588687 NR1H2P55055 460 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 PPP2R2BQ00005 443 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 BTKQ06187 659 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 C17orf67Q0P5P2 114 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 C2orf80Q0P641 193 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 GTPBP8Q8N3Z3 284 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-204ENST00000588687 SPATA3Q8NHX4 192 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 TMEM171Q8WVE6 324 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 PLPPR2Q96GM1 343 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 NFU1Q9UMS0 254 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 VDAC3Q9Y277 283 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 STK38LQ9Y2H1 464 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 ABCA1O95477 2261 aa16.47■□□□□ 0.23
CCDC43-204ENST00000588687 FREM1Q5H8C1 2179 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 ALG1L2C9J202 215 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 ADAMDEC1O15204 470 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 GMFGO60234 142 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 CRLF1O75462 422 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 PSMB1P20618 241 aaKnown RBP16.46■□□□□ 0.23
CCDC43-204ENST00000588687 CKAP4Q07065 602 aaKnown RBP16.46■□□□□ 0.23
CCDC43-204ENST00000588687 TNK1Q13470 666 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 ZAR1Q86SH2 424 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 GALNT10Q86SR1 603 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 LCA5Q86VQ0 697 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 LILRB1Q8NHL6 650 aaPredicted RBP16.46■□□□□ 0.23
CCDC43-204ENST00000588687 CDC26Q8NHZ8 85 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 PIK3R3Q92569 461 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 TBL1XR1Q9BZK7 514 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 ACTR6Q9GZN1 396 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 OR10A4Q9H209 315 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 CXorf56Q9H5V9 222 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 TNFRSF12AQ9NP84 129 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 MIEF1Q9NQG6 463 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 CCL27Q9Y4X3 112 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 POLR3HQ9Y535 204 aaPredicted RBP16.46■□□□□ 0.23
CCDC43-204ENST00000588687 ANK2Q01484 3957 aa16.46■□□□□ 0.23
CCDC43-204ENST00000588687 SVEP1Q4LDE5 3571 aa16.46■□□□□ 0.22
CCDC43-204ENST00000588687 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 A0A087WUV0 522 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-204ENST00000588687 NKX2-2O95096 273 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 NGFRP08138 427 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 AGTR1P30556 359 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 NTSP30990 170 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 RFX3P48380 749 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 ZNHIT3Q15649 155 aaPredicted RBP16.45■□□□□ 0.22
CCDC43-204ENST00000588687 SGCBQ16585 318 aa16.45■□□□□ 0.22
CCDC43-204ENST00000588687 PLPPR5Q32ZL2 321 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms