RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ZNF141Q15928 474 aa24.03■■□□□ 1.44
SCAMP4-210ENST00000588555 DECR1Q16698 335 aa24.03■■□□□ 1.44
SCAMP4-210ENST00000588555 MARCH9Q86YJ5 346 aa24.03■■□□□ 1.44
SCAMP4-210ENST00000588555 HIPK1Q86Z02 1210 aa24.03■■□□□ 1.44
SCAMP4-210ENST00000588555 FAM32AQ9Y421 112 aaKnown RBP24.03■■□□□ 1.44
SCAMP4-210ENST00000588555 AHCTF1Q8WYP5 2266 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 PCDH17O14917 1159 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 FRS3O43559 492 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 IL33O95760 270 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 PPP2R2BQ00005 443 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 HLA-DQA1Q5Y7H0 255 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 HSDL2Q6YN16 418 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 DEF8Q6ZN54 512 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 TSPYL5Q86VY4 417 aaPredicted RBP24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 OR4C15Q8NGM1 316 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 PHF10Q8WUB8 498 aaKnown RBP24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 NRBF2Q96F24 287 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 ACER3Q9NUN7 267 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 TCFL5Q9UL49 500 aa24.02■■□□□ 1.44
SCAMP4-210ENST00000588555 CDHR4A6H8M9 788 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 ALPLP05186 524 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 LIMS1P48059 325 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 NR0B1P51843 470 aaKnown RBP24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 SPIBQ01892 262 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 DAG1Q14118 895 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 LAPTM4AQ15012 233 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 TAF11Q15544 211 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 EIPR1Q53HC9 387 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 PDZK1Q5T2W1 519 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 MRPL2Q5T653 305 aaKnown RBP24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 ESX1Q8N693 406 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 EFHD2Q96C19 240 aaPredicted RBP24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 DHRS1Q96LJ7 313 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 GABARAPL1Q9H0R8 117 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 KLHL28Q9NXS3 571 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 SLC13A4Q9UKG4 626 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 A4GNTQ9UNA3 340 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 IGHV1-45A0A0A0MS14 117 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 A0A1W2PQ72 361 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 CDC14CA4D256 554 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 TPST2O60704 377 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 ACADSP16219 412 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 MMP11P24347 488 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 NOVA1P51513 510 aaKnown RBP24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 ALDH3A2P51648 485 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 HMGA2P52926 109 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 ATP12AP54707 1039 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 CDH12P55289 794 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 GANABQ14697 944 aaKnown RBP24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 MAGEE2Q8TD90 523 aaPredicted RBP24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 SDCCAG3Q96C92 435 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 HSPBAP1Q96EW2 488 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 OSBPL10Q9BXB5 764 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 ZNF700Q9H0M5 742 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 USE1Q9NZ43 259 aa24.01■■□□□ 1.43
SCAMP4-210ENST00000588555 TNFRSF11BO00300 401 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 COX6A1P12074 109 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 PRKACGP22612 351 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 RPS18P62269 152 aaKnown RBP24■■□□□ 1.43
SCAMP4-210ENST00000588555 CMPK2Q5EBM0 449 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 WLSQ5T9L3 541 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 OR4C3Q8NH37 302 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 OR8K3Q8NH51 312 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 NUBPLQ8TB37 319 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 DIO2Q92813 273 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 TP53INP1Q96A56 240 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 RHCGQ9UBD6 479 aa24■■□□□ 1.43
SCAMP4-210ENST00000588555 PTPRBP23467 1997 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 TRBV11-1A0A0K0K1C0 115 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 TMEM200CA6NKL6 621 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 TERTO14746 1132 aaKnown RBP23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 BCAS1O75363 584 aaPredicted RBP23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 HPRP00739 348 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 RNF144AP50876 292 aaPredicted RBP23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 PSMD4P55036 377 aaKnown RBP23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 ANKRD34AQ69YU3 496 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 KIRREL2Q6UWL6 708 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 CYP4Z1Q86W10 505 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 NLGN4XQ8N0W4 816 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 NLGN4YQ8NFZ3 816 aaPredicted RBP23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 IMMP1LQ96LU5 166 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 POLR1BQ9H9Y6 1135 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 NMNAT1Q9HAN9 279 aaPredicted RBP23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 SMURF2Q9HAU4 748 aa23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 FARSAQ9Y285 508 aaKnown RBP23.99■■□□□ 1.43
SCAMP4-210ENST00000588555 SOCS6O14544 535 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 IGHEP01854 428 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 STAT5AP42229 794 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 HSPA13P48723 471 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 ARHGDIAP52565 204 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 ZNF136P52737 540 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 PIN1Q13526 163 aaPredicted RBP23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 NHSL2Q5HYW2 709 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 PRR22Q8IZ63 422 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 OR52J3Q8NH60 311 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 ADAMTS14Q8WXS8 1223 aa23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 RBM4BQ9BQ04 359 aaKnown RBP23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 RBM4Q9BWF3 364 aaKnown RBP23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 LIN28AQ9H9Z2 209 aaKnown RBP23.98■■□□□ 1.43
SCAMP4-210ENST00000588555 TSPAN2O60636 221 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms