RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DBIP07108 87 aaKnown RBP10.41□□□□□ -0.74
VMP1-207ENST00000588131 THBS1P07996 1170 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 WT1P19544 449 aaPredicted RBP10.41□□□□□ -0.74
VMP1-207ENST00000588131 PRKAR1BP31321 381 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 ATP12AP54707 1039 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 PLAURQ03405 335 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 SLC34A1Q06495 639 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 ZNF141Q15928 474 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 SNCBQ16143 134 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 GRAMD1BQ3KR37 738 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 PDZK1Q5T2W1 519 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 FCRLBQ6BAA4 426 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 DHRS4L2Q6PKH6 230 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 LYPD8Q6UX82 237 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 AMIGO2Q86SJ2 522 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 CARM1Q86X55 608 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 RBM45Q8IUH3 476 aaKnown RBP10.41□□□□□ -0.74
VMP1-207ENST00000588131 ZDHHC21Q8IVQ6 265 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 CLIP4Q8N3C7 705 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 OR4C3Q8NH37 302 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 RASSF5Q8WWW0 418 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 GEMIN6Q8WXD5 167 aaKnown RBP10.41□□□□□ -0.74
VMP1-207ENST00000588131 PROX1Q92786 737 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 DIO2Q92813 273 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 ADOQ96SZ5 270 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 ARHGDIGQ99819 225 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 AMBRA1Q9C0C7 1298 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 SEMA6AQ9H2E6 1030 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 IL1RAPQ9NPH3 570 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 AGPAT4Q9NRZ5 378 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 RLIMQ9NVW2 624 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 MYOTQ9UBF9 498 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 IFT52Q9Y366 437 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 NPFFR2Q9Y5X5 522 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 EXPH5Q8NEV8 1989 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 KNTC1P50748 2209 aa10.41□□□□□ -0.74
VMP1-207ENST00000588131 J3KTA2 159 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 SYT5O00445 386 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 ICOSLGO75144 302 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 UGT2B11O75310 529 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 OR2J2O76002 312 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 UTS2O95399 124 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 NID1P14543 1247 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 IL7RP16871 459 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 FASP25445 335 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 IL12BP29460 328 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 KRT20P35900 424 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 ST13P50502 369 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 PSMD4P55036 377 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 NRG3P56975 720 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 CHAF1BQ13112 559 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 LARS2Q15031 903 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 NPTX1Q15818 432 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 ATP6AP1Q15904 470 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 LIN52Q52LA3 116 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 MRPL2Q5T653 305 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 RNF220Q5VTB9 566 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 TAGAPQ8N103 731 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 ZNF614Q8N883 585 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 NRG4Q8WWG1 115 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 PMM1Q92871 262 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 NAF1Q96HR8 494 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 TRIM45Q9H8W5 580 aaPredicted RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 CACYBPQ9HB71 228 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 ZBTB20Q9HC78 741 aaPredicted RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 VNN3Q9NY84 501 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 NDUFAF4Q9P032 175 aa10.4□□□□□ -0.74
VMP1-207ENST00000588131 C6orf203Q9P0P8 240 aaPredicted RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 MRTO4Q9UKD2 239 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 CNOT1A5YKK6 2376 aaKnown RBP10.4□□□□□ -0.74
VMP1-207ENST00000588131 PTPRZ1P23471 2315 aaPredicted RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 NKX2-8O15522 239 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 TLX3O43711 291 aaPredicted RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 SEMA7AO75326 666 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 ITGA10O75578 1167 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 PPM1BO75688 479 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 OXSR1O95747 527 aaPredicted RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 CST1P01037 141 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 LDLRP01130 860 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 IFNW1P05000 195 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 SERPINA7P05543 415 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 FCGR1AP12314 374 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 ICAM2P13598 275 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 FUT4P22083 530 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 YAP1P46937 504 aaKnown RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 PNLIPRP2P54317 469 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 FBXW4P57775 412 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 PSPHP78330 225 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 KCNC4Q03721 635 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 FGFBP1Q14512 234 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 NRF1Q16656 503 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 NDUFAF6Q330K2 333 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 KLHL26Q53HC5 615 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 FNDC7Q5VTL7 733 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 LPCAT4Q643R3 524 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 B3GNTL1Q67FW5 361 aaPredicted RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 APOOLQ6UXV4 268 aa10.39□□□□□ -0.75
VMP1-207ENST00000588131 PIWIL3Q7Z3Z3 882 aaKnown RBP10.39□□□□□ -0.75
VMP1-207ENST00000588131 KBTBD2Q8IY47 623 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms