RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 CDC40O60508 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 HCN1O60741 890 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 DNAJA2O60884 412 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 NME6O75414 186 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 SLC22A3O75751 556 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 BAG2O95816 211 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 HPNP05981 417 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 PRPS2P11908 318 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 ATP6V1C1P21283 382 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 ELAVL4P26378 380 aaKnown RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 PTPN6P29350 595 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 RPL3P39023 403 aaKnown RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 PNLIPRP2P54317 469 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 RPP38P78345 283 aaKnown RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 CCNIQ14094 377 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 ANKRD26P1Q6NSI1 321 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 SLC30A6Q6NXT4 461 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 PAOXQ6QHF9 649 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 BLOC1S3Q6QNY0 202 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 ZNF551Q7Z340 670 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 CAMKMTQ7Z624 323 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 LIX1Q8N485 282 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 MARVELD2Q8N4S9 558 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 GLB1L3Q8NCI6 653 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 OR5M3Q8NGP4 307 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 CLHC1Q8NHS4 586 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 PSMA8Q8TAA3 256 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 GFM2Q969S9 779 aaKnown RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 TMBIM1Q969X1 311 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 CIDECQ96AQ7 238 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 SPDL1Q96EA4 605 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 GIMAP5Q96F15 307 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 ZBED6CLQ96FA7 236 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 COL21A1Q96P44 957 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 ZNF184Q99676 751 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 C1orf50Q9BV19 199 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 OSBPL11Q9BXB4 747 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 DEFB127Q9H1M4 99 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 VCXQ9H320 206 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 TP63Q9H3D4 680 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 SIRT3Q9NTG7 399 aaPredicted RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 DDX18Q9NVP1 670 aaKnown RBP7.89□□□□□ -1.15
ATG4D-202ENST00000585437 SPRR3Q9UBC9 169 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 B4GALT7Q9UBV7 327 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 SH3BGRL2Q9UJC5 107 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 LRCH1Q9Y2L9 728 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 PCDHGB3Q9Y5G1 929 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 DCHS2Q6V1P9 2916 aa7.89□□□□□ -1.15
ATG4D-202ENST00000585437 FBN2P35556 2912 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 PRAMEF25A6NGN4 478 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 TTC36A6NLP5 189 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 B4DXG7 233 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 FBP2O00757 339 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 BCKDKO14874 412 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 SNPHO15079 494 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 ANKRD28O15084 1053 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 AKAP10O43572 662 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 ICOSLGO75144 302 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 NKX2-2O95096 273 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 TPOP07202 933 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 GDF1P27539 372 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 HPCAL1P37235 193 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 CDK9P50750 372 aaKnown RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 POLR2JP52435 117 aaKnown RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 GTF2A1P52655 376 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 GAS1P54826 345 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 ZNF155Q12901 538 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 HSPB3Q12988 150 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 CEACAM7Q14002 265 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 TRIM25Q14258 630 aaKnown RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 SLC10A1Q14973 349 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 CDSNQ15517 529 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 CYP27C1Q4G0S4 372 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 NHSL2Q5HYW2 709 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 IL23RQ5VWK5 629 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 TIGD3Q6B0B8 471 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 C8orf82Q6P1X6 216 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 NCCRP1Q6ZVX7 275 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 R3HCC1LQ7Z5L2 792 aaKnown RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 FUNDC1Q8IVP5 155 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 SLC44A2Q8IWA5 706 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 EID3Q8N140 333 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 RPRMLQ8N4K4 120 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 BHLHE22Q8NFJ8 381 aaPredicted RBP7.88□□□□□ -1.15
ATG4D-202ENST00000585437 OR7A2PQ8NGA2 310 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 OR4N2Q8NGD1 307 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 OR9I1Q8NGQ6 314 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 ZFP28Q8NHY6 868 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 NEIL3Q8TAT5 605 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 COQ8BQ96D53 544 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 LRGUKQ96M69 825 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 MS4A4EQ96PG1 132 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 METTL7AQ9H8H3 244 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 GALNT9Q9HCQ5 603 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 BATF3Q9NR55 127 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 PNPLA3Q9NST1 481 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 TMEM181Q9P2C4 612 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 ABCD2Q9UBJ2 740 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 ABCG2Q9UNQ0 655 aa7.88□□□□□ -1.15
ATG4D-202ENST00000585437 AP3M1Q9Y2T2 418 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms