RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 EPPINO95925 133 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 TUBBP07437 444 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 GABRA1P14867 456 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 HK1P19367 917 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 PRPS1L1P21108 318 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 BMP5P22003 454 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 ZFP36L2P47974 494 aaKnown RBP11.39□□□□□ -0.59
CBX1-206ENST00000581003 CLDN15P56746 228 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 CLDN8P56748 225 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 CLDN18P56856 261 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 CASP8Q14790 479 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 MLC1Q15049 377 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 NDUFAF6Q330K2 333 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 SPDYE7PQ495Y7 208 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 UBQLNLQ8IYU4 475 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 GCNT2Q8N0V5 402 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 COX18Q8N8Q8 333 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 FAM110BQ8TC76 370 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 OR5P2Q8WZ92 322 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 PHF3Q92576 2039 aaKnown RBP11.39□□□□□ -0.59
CBX1-206ENST00000581003 SH3YL1Q96HL8 342 aaPredicted RBP11.39□□□□□ -0.59
CBX1-206ENST00000581003 PCNX1Q96RV3 2341 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 TREX2Q9BQ50 279 aaPredicted RBP11.39□□□□□ -0.59
CBX1-206ENST00000581003 MEAF6Q9HAF1 191 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 C3orf14Q9HBI5 128 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 KCNJ16Q9NPI9 418 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 ABCG2Q9UNQ0 655 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 PDZD2O15018 2839 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 CACNA1CQ13936 2221 aa11.39□□□□□ -0.59
CBX1-206ENST00000581003 FREM3P0C091 2139 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 CENPVL1A0A0U1RR11 272 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 CLCA1A8K7I4 914 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 CFLARO15519 480 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 ERLIN1O75477 346 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 ACTL6AO96019 429 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 ALOX5P09917 674 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 EPHA3P29320 983 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 IL12AP29459 219 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 CEACAM8P31997 349 aaPredicted RBP11.38□□□□□ -0.59
CBX1-206ENST00000581003 CCT3P49368 545 aaKnown RBP11.38□□□□□ -0.59
CBX1-206ENST00000581003 SUCLG1P53597 346 aaKnown RBP11.38□□□□□ -0.59
CBX1-206ENST00000581003 CLDN20P56880 219 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 C21orf58P58505 322 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 SPANXN4Q5MJ08 99 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.38□□□□□ -0.59
CBX1-206ENST00000581003 RAET1LQ5VY80 246 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 NSUN5P2Q63ZY6 315 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 LACC1Q8IV20 430 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 WDR75Q8IWA0 830 aaKnown RBP11.38□□□□□ -0.59
CBX1-206ENST00000581003 CEP70Q8NHQ1 597 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 PSMA8Q8TAA3 256 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 ZNF524Q96C55 264 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 C1GALT1C1Q96EU7 318 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 TBL1XR1Q9BZK7 514 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 BHLHE41Q9C0J9 482 aaPredicted RBP11.38□□□□□ -0.59
CBX1-206ENST00000581003 VDAC3Q9Y277 283 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.38□□□□□ -0.59
CBX1-206ENST00000581003 HCFC1P51610 2035 aa11.38□□□□□ -0.59
CBX1-206ENST00000581003 RNF103-CHMP3A0A140T963 221 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 OR2M5A3KFT3 312 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 MBD3L4A6NDZ8 208 aaPredicted RBP11.37□□□□□ -0.59
CBX1-206ENST00000581003 MBD3L3A6NE82 208 aaPredicted RBP11.37□□□□□ -0.59
CBX1-206ENST00000581003 MBD3L5A6NJ08 208 aaPredicted RBP11.37□□□□□ -0.59
CBX1-206ENST00000581003 AHRRA9YTQ3 701 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 H3BML4 177 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 SEC14L5O43304 696 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 SCN2BO60939 215 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 TGM6O95932 706 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 OPN1LWP04000 364 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 CPN1P15169 458 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 ZNF708P17019 499 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 LBPP18428 481 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 PTGER4P35408 488 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 RPL3P39023 403 aaKnown RBP11.37□□□□□ -0.59
CBX1-206ENST00000581003 DGKQP52824 942 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 DSCR4P56555 118 aaPredicted RBP11.37□□□□□ -0.59
CBX1-206ENST00000581003 UFM1P61960 85 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 PSPHP78330 225 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 PRR5P85299 388 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 OCRLQ01968 901 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.37□□□□□ -0.59
CBX1-206ENST00000581003 VPS26BQ4G0F5 336 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 SLC9B1Q4ZJI4 515 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 CDC73Q6P1J9 531 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 GDF7Q7Z4P5 450 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 CAMKMTQ7Z624 323 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 HMGN2P46Q86SG4 172 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 ADGRE4PQ86SQ3 457 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 PM20D2Q8IYS1 436 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 OR4A15Q8NGL6 344 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 MBD3L2Q8NHZ7 208 aaPredicted RBP11.37□□□□□ -0.59
CBX1-206ENST00000581003 SMPDL3BQ92485 455 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 ZNF845Q96IR2 970 aaPredicted RBP11.37□□□□□ -0.59
CBX1-206ENST00000581003 OR7D2Q96RA2 312 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 SH3GL2Q99962 352 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 PIGUQ9H490 435 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 ATAD3AQ9NVI7 634 aa11.37□□□□□ -0.59
CBX1-206ENST00000581003 CLCF1Q9UBD9 225 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms