RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 BCHEP06276 602 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 THBS1P07996 1170 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 CD96P40200 585 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ATP12AP54707 1039 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 SLC25A3Q00325 362 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 CDK6Q00534 326 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 SCARB2Q14108 478 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 INAQ16352 499 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 SYPL1Q16563 259 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 COL28A1Q2UY09 1125 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ZNF468Q5VIY5 522 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 TYW3Q6IPR3 259 aaKnown RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 C16orf47Q6ZP98 133 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 LINC00696Q6ZRV3 163 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 RINLQ6ZS11 566 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 Q6ZS92 163 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 CCDC80Q76M96 950 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ZNF227Q86WZ6 799 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 PTRH1Q86Y79 214 aaKnown RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 MISPQ8IVT2 679 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 CMIPQ8IY22 773 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ZZZ3Q8IYH5 903 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 FBXW8Q8N3Y1 598 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ZADH2Q8N4Q0 377 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 TMEM178AQ8NBL3 297 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 LSM14AQ8ND56 463 aaKnown RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 PSD4Q8NDX1 1056 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 BHLHE22Q8NFJ8 381 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 OR52E4Q8NGH9 312 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 FBXO27Q8NI29 283 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 C9orf43Q8TAL5 461 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 SPPL2AQ8TCT8 520 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 TMEM19Q96HH6 336 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ADOQ96SZ5 270 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 TREX2Q9BQ50 279 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 LRMDAQ9H2I8 198 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 MUC13Q9H3R2 512 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 EVA1AQ9H8M9 152 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 TIMMDC1Q9NPL8 285 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 ANGPT4Q9Y264 503 aa9.55□□□□□ -0.88
CCDC47-203ENST00000580986 KLF13Q9Y2Y9 288 aaPredicted RBP9.55□□□□□ -0.88
CCDC47-203ENST00000580986 PRORSD1PA6NEY8 169 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 AGAP5A6NIR3 686 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 C5orf58C9J3I9 102 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 GYG2O15488 501 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SLC28A2O43868 658 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 FADS1O60427 444 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SLC25A12O75746 678 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 UTS2O95399 124 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 ZIC2O95409 532 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 CHRM4P08173 479 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 CYP4B1P13584 511 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 CD46P15529 392 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 EVI2BP34910 448 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 DCTP40126 519 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 CASP3P42574 277 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 GSK3BP49841 420 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 FBXW4P57775 412 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 ARG2P78540 354 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 OC90Q02509 493 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 LIPEQ05469 1076 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 BNIP2Q12982 314 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 RAPSNQ13702 412 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 OR1C1Q15619 314 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 FLYWCH1Q4VC44 716 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 GPAT3Q53EU6 434 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 KLHL26Q53HC5 615 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SLC22A10Q63ZE4 541 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SLC30A6Q6NXT4 461 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 RPUSD3Q6P087 351 aaKnown RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 FIGNL1Q6PIW4 674 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 IL20RBQ6UXL0 311 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 PATL1Q86TB9 770 aaKnown RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 KRT73Q86Y46 540 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 MICU2Q8IYU8 434 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 ANKFN1Q8N957 763 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 OR10G3Q8NGC4 313 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 RASSF5Q8WWW0 418 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 POP5Q969H6 163 aaKnown RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SLC35B4Q969S0 331 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 EFHD2Q96C19 240 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 OTUB1Q96FW1 271 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 ZNF607Q96SK3 696 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 CDRT15Q96T59 188 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SPATA5L1Q9BVQ7 753 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 ANGPTL4Q9BY76 406 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 TRIM8Q9BZR9 551 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 RUBCNLQ9H714 662 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 ZBTB20Q9HC78 741 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 SACM1LQ9NTJ5 587 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 CNOT11Q9UKZ1 510 aaKnown RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 IFT52Q9Y366 437 aa9.54□□□□□ -0.88
CCDC47-203ENST00000580986 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
CCDC47-203ENST00000580986 IGLV3-32A0A0A0MS00 114 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 PRAMEF25A6NGN4 478 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 SCDO00767 359 aa9.53□□□□□ -0.88
CCDC47-203ENST00000580986 ADAM10O14672 748 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms