RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 OR2M5A3KFT3 312 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 LYPLA1O75608 230 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 RAF1P04049 648 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 HRGP04196 525 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 IL11P20809 199 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 MAPK1P28482 360 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 SERPINB4P48594 390 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 STARP49675 285 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 CLDN15P56746 228 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 C21orf58P58505 322 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 RPS3AP61247 264 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 FAM219BQ5XKK7 198 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 OR5M10Q6IEU7 315 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 GTPBP8Q8N3Z3 284 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 CCDC63Q8NA47 563 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 DUSP19Q8WTR2 217 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 GFM2Q969S9 779 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 STARD4Q96DR4 205 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 GIMAP5Q96F15 307 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 STACQ99469 402 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 TBL1XR1Q9BZK7 514 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 TUBB1Q9H4B7 451 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 GLRX2Q9NS18 164 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 CCM2LQ9NUG4 571 aaPredicted RBP13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 ATP6V1HQ9UI12 483 aa13.08□□□□□ -0.32
SMARCE1-216ENST00000580419 SH3D21A4FU49 640 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 SNUPNO95149 360 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 UTS2O95399 124 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 ANGPTL1O95841 491 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 TGM6O95932 706 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 HK1P19367 917 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 GABRA3P34903 492 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 MANFP55145 182 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 SRYQ05066 204 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 SMU1Q2TAY7 513 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 XKR7Q5GH72 579 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 RAET1LQ5VY80 246 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 CLEC6AQ6EIG7 209 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 ZNF551Q7Z340 670 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 MTERF4Q7Z6M4 381 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 OR2T11Q8NH01 316 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 EPS8L3Q8TE67 593 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 ZBTB8AQ96BR9 441 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 SLC39A3Q9BRY0 314 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 TMEM109Q9BVC6 243 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 UBQLN4Q9NRR5 601 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 ZNF337Q9Y3M9 751 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 TESMINQ9Y4I5 508 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 TRAF6Q9Y4K3 522 aa13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 NSD1Q96L73 2696 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-216ENST00000580419 ADAMDEC1O15204 470 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 SCO2O43819 266 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 NME6O75414 186 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 ATE1O95260 518 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 CGAP01215 116 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 KRT16P08779 473 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 BCKDHAP12694 445 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 CD99P14209 185 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 CD79BP40259 229 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 KIR2DL2P43627 348 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 CPA2P48052 419 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 PRIM2P49643 509 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 EMBQ6PCB8 327 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 APOOLQ6UXV4 268 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 P4HA3Q7Z4N8 544 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 EXOC3L1Q86VI1 746 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 KIRREL3Q8IZU9 778 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 NUP43Q8NFH3 380 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 CDC26Q8NHZ8 85 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 OIT3Q8WWZ8 545 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 MOAP1Q96BY2 351 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 PIP5K1AQ99755 562 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 YIPF4Q9BSR8 244 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 RTN4RQ9BZR6 473 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 OR10A4Q9H209 315 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 NEUROD4Q9HD90 331 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 ATAD3AQ9NVI7 634 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 BEX4Q9NWD9 120 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 MED11Q9P086 117 aa13.06□□□□□ -0.32
SMARCE1-216ENST00000580419 CASKO14936 926 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 NDUFB5O43674 189 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 TMCC2O75069 709 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 KCNK2O95069 426 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 OXSR1O95747 527 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 PPP3CBP16298 524 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 PSMA4P25789 261 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 ADH6P28332 368 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 GPC1P35052 558 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 HPCAL1P37235 193 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 EIF1P41567 113 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 RAC1P63000 192 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 HSPB3Q12988 150 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 GRAMD1BQ3KR37 738 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 ZNF385BQ569K4 471 aa13.05□□□□□ -0.32
SMARCE1-216ENST00000580419 ARL13AQ5H913 290 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms