RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 GLSO94925 669 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 UNC5CO95185 931 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM107AO95990 144 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 IFNA16P05015 189 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 HMGN2P05204 90 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 IL6P05231 212 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 GSNP06396 782 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 GUSBP08236 651 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 T-ENOLP0DO92 83 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CCL3P10147 92 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 TROVE2P10155 538 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ICAM2P13598 275 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ITGA3P26006 1051 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ABCD3P28288 659 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ADSLP30566 484 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NTSP30990 170 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 S100A3P33764 101 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 MPIP34949 423 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PIGAP37287 484 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 HLCSP50747 726 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 TDGF1P3P51864 188 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PGDP52209 483 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CRYBA2P53672 197 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 KRTAP10-9P60411 292 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 RPS26P62854 115 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 SELPLGQ14242 412 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CDSNQ15517 529 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ADRM1Q16186 407 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NNATQ16517 81 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NTRK2Q16620 822 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 MEP1AQ16819 746 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PLEKHN1Q494U1 663 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NADK2Q4G0N4 442 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PRR30Q53SZ7 412 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 COQ5Q5HYK3 327 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NXNQ6DKJ4 435 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 RPUSD3Q6P087 351 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CDC73Q6P1J9 531 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 APOOLQ6UXV4 268 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 HSDL2Q6YN16 418 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 LINC00696Q6ZRV3 163 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 OLIG3Q7RTU3 272 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NET1Q7Z628 596 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 COMTD1Q86VU5 262 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CALHM3Q86XJ0 350 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 SIAH3Q8IW03 269 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF843Q8N446 348 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC15A4Q8N697 577 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 FITM2Q8N6M3 262 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NATD1Q8N6N6 113 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 HORMAD2Q8N7B1 307 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 LSM14AQ8ND56 463 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CHDHQ8NE62 594 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NUP43Q8NFH3 380 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 OR5D16Q8NGK9 328 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 OR5AK3PQ8NH89 298 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 FBXO27Q8NI29 283 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 C9orf43Q8TAL5 461 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PAQR8Q8TEZ7 354 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 THAP3Q8WTV1 239 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF524Q96C55 264 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 SPDL1Q96EA4 605 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NEURL3Q96EH8 262 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 OTUB1Q96FW1 271 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 AURKBQ96GD4 344 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 RBM18Q96H35 190 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 LCORQ96JN0 433 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ART5Q96L15 291 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 MS4A4EQ96PG1 132 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 OR7D2Q96RA2 312 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 TAAR6Q96RI8 345 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 BBS4Q96RK4 519 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 NODALQ96S42 347 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CCT8L2Q96SF2 557 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ELAC2Q9BQ52 826 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 GPATCH1Q9BRR8 931 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC25A23Q9BV35 468 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 TRIM8Q9BZR9 551 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PIGUQ9H490 435 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 RABEP2Q9H5N1 569 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CDCP1Q9H5V8 836 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 IL1RL2Q9HB29 575 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 DUSP22Q9NRW4 184 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ATAD3AQ9NVI7 634 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PLA2G3Q9NZ20 509 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CCDC167Q9P0B6 97 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 VAPAQ9P0L0 249 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 SH3BP4Q9P0V3 963 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ARMCX1Q9P291 453 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ST6GALNAC2Q9UJ37 374 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PSME2Q9UL46 239 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 MAPRE3Q9UPY8 281 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 YARS2Q9Y2Z4 477 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 CHST2Q9Y4C5 530 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 PCDHGB6Q9Y5F9 930 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF780BQ9Y6R6 833 aa3.47□□□□□ -1.85
SMARCE1-215ENST00000578995 DOPEY1Q5JWR5 2465 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 RP1L1Q8IWN7 2480 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms