RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 BAG5Q9UL15 447 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 IFT52Q9Y366 437 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 SH3GLB1Q9Y371 365 aa22.13■■□□□ 1.13
ATPAF1-213ENST00000574428 NPIPB9F8W1W9 429 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ITGA10O75578 1167 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 TIPRLO75663 272 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 UTS2O95399 124 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 EPPINO95925 133 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 SEMG1P04279 462 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 RAP2AP10114 183 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 CYP4B1P13584 511 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 CHAF1BQ13112 559 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF836Q6ZNA1 936 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 SIRT6Q8N6T7 355 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 OR5M3Q8NGP4 307 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 SLC22A8Q8TCC7 542 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 BRIX1Q8TDN6 353 aaKnown RBP22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 PROX1Q92786 737 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 PMM1Q92871 262 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 THOC3Q96J01 351 aaKnown RBP22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 CHID1Q9BWS9 393 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 PINK1Q9BXM7 581 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 CDCP1Q9H5V8 836 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 TRIM45Q9H8W5 580 aaPredicted RBP22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ZBTB20Q9HC78 741 aaPredicted RBP22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ARMC1Q9NVT9 282 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 CHST2Q9Y4C5 530 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 CEP295Q9C0D2 2601 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 CELSR3Q9NYQ7 3312 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ABCB7O75027 752 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ICOSLGO75144 302 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 UGT2B11O75310 529 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 PPM1BO75688 479 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ADRB1P08588 477 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ATP12AP54707 1039 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 LARS2Q15031 903 aaKnown RBP22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 GRAMD1BQ3KR37 738 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 IFI44LQ53G44 452 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 RPS19BP1Q86WX3 136 aaKnown RBP22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 SLC5A8Q8N695 610 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 PAPD5Q8NDF8 572 aaKnown RBP22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 FER1L6-AS2Q96M78 137 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 RLIMQ9NVW2 624 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF232Q9UNY5 417 aa22.12■■□□□ 1.13
ATPAF1-213ENST00000574428 THBS1P07996 1170 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 NID1P14543 1247 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 PRKAR1BP31321 381 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 PNLIPRP2P54317 469 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 FBXW4P57775 412 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF141Q15928 474 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 LIN52Q52LA3 116 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 B3GNTL1Q67FW5 361 aaPredicted RBP22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 DHRS4L2Q6PKH6 230 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 CLIP4Q8N3C7 705 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 SNIP1Q8TAD8 396 aaKnown RBP22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF354BQ96LW1 612 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 WFDC6Q9BQY6 131 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 ATP13A2Q9NQ11 1180 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 LRRC42Q9Y546 428 aa22.11■■□□□ 1.13
ATPAF1-213ENST00000574428 PRAMEF25A6NGN4 478 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 OR6C70A6NIJ9 312 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 ARGFXA6NJG6 315 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 hCG_2039718K7EN88 272 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 HS6ST1O60243 411 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 MLF1P58340 268 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 EEF1A1P68104 462 aaKnown RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 VLDLRP98155 873 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 AIMP2Q13155 320 aaKnown RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 LYPD8Q6UX82 237 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 CLEC1AQ8NC01 280 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 APOBEC4Q8WW27 367 aaKnown RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 GEMIN6Q8WXD5 167 aaKnown RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 THAP4Q8WY91 577 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 UBQLN4Q9NRR5 601 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 ZNF891A8MT65 544 aaPredicted RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 M0R3H8 397 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 OXSR1O95747 527 aaPredicted RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 ITGA3P26006 1051 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 SOX3P41225 446 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 MRPL2Q5T653 305 aaKnown RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 H3F3CQ6NXT2 135 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 ZDHHC21Q8IVQ6 265 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 ARMC10Q8N2F6 343 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 PQLC1Q8N2U9 271 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 VANGL1Q8TAA9 524 aaPredicted RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 LRTOMTQ8WZ04 291 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 PSMF1Q92530 271 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 HOXD1Q9GZZ0 328 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 IL1RAPQ9NPH3 570 aa22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 YARS2Q9Y2Z4 477 aaKnown RBP22.1■■□□□ 1.13
ATPAF1-213ENST00000574428 FRS3O43559 492 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 BCAS1O75363 584 aaPredicted RBP22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 LGI1O95970 557 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 FBXO45P0C2W1 286 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 CDC20Q12834 499 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 TAF11Q15544 211 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 LACC1Q8IV20 430 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 LILRA2Q8N149 483 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 SLC15A4Q8N697 577 aa22.09■■□□□ 1.13
ATPAF1-213ENST00000574428 OR4D11Q8NGI4 311 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms