RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 IGHG3P01860 377 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 HSD17B1P14061 328 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 AGAP20933 346 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 ME2P23368 584 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 PTGER1P34995 402 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 PTGS2P35354 604 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 SOX18P35713 384 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 RFC3P40938 356 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 MC3RP41968 323 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 NR0B1P51843 470 aaKnown RBP13.18□□□□□ -0.3
ABR-223ENST00000573895 MTPNP58546 118 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 PSPHP78330 225 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 RPP38P78345 283 aaKnown RBP13.18□□□□□ -0.3
ABR-223ENST00000573895 PLGLB1Q02325 96 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 LIPEQ05469 1076 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 RGNQ15493 299 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 TRMT12Q53H54 448 aaKnown RBP13.18□□□□□ -0.3
ABR-223ENST00000573895 FAM111BQ6SJ93 734 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 FAM109AQ8N4B1 249 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 ZNF808Q8N4W9 903 aaPredicted RBP13.18□□□□□ -0.3
ABR-223ENST00000573895 OR7G2Q8NG99 324 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 FAM57AQ8TBR7 257 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
ABR-223ENST00000573895 HSPBAP1Q96EW2 488 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 QPCTLQ9NXS2 382 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 TINAGQ9UJW2 476 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 FAF1Q9UNN5 650 aaPredicted RBP13.18□□□□□ -0.3
ABR-223ENST00000573895 NOTCH2Q04721 2471 aa13.18□□□□□ -0.3
ABR-223ENST00000573895 CACNA1CQ13936 2221 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 A0A0G2JMM0 328 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 A0A1B0GTH9 108 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 A0A1B0GVC2 190 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 A0A1W2PPB8 328 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 A0A1W2PRS3 328 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 A1L4Q6 167 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 OR14I1A6ND48 311 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 KIR3DP1A8MWS1 328 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 E9PLN8 166 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 AGR2O95994 175 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 BMP2P12643 396 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 NQO1P15559 274 aaKnown RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 DRD5P21918 477 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 MATN1P21941 496 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 HTR1EP28566 365 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 PPICP45877 212 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 PRKAG1P54619 331 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 ERICH5Q6P6B1 374 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 TMEM81Q6P7N7 255 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 XKRXQ6PP77 449 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 FGD2Q7Z6J4 655 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 CALHM3Q86XJ0 350 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 RNF130Q86XS8 419 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 DOLPP1Q86YN1 238 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 METTL25Q8N6Q8 603 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 FAM13CQ8NE31 585 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 OR10G3Q8NGC4 313 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 OR10A6Q8NH74 314 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 OR5AK3PQ8NH89 298 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 AURKBQ96GD4 344 aaPredicted RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 LCORQ96JN0 433 aaPredicted RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 ZNF583Q96ND8 569 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 MS4A4EQ96PG1 132 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 VKORC1Q9BQB6 163 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 ACTRT3Q9BYD9 372 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 GPATCH2Q9NW75 528 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 GIN1Q9NXP7 522 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 TUBA8Q9NY65 449 aaPredicted RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 BCAP29Q9UHQ4 241 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 CNOT11Q9UKZ1 510 aaKnown RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 BOKQ9UMX3 212 aaPredicted RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 MEMO1Q9Y316 297 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 PCDHGB3Q9Y5G1 929 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 KLF2Q9Y5W3 355 aaPredicted RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.17□□□□□ -0.3
ABR-223ENST00000573895 NCKAP5O14513 1909 aa13.17□□□□□ -0.3
ABR-223ENST00000573895 CACNA1DQ01668 2161 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 PRORSD1PA6NEY8 169 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 G3V3Y1 287 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 TO15178 435 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 SUSD5O60279 629 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 SNX4O95219 450 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 PSMG1O95456 288 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 HMGN2P05204 90 aaKnown RBP13.16□□□□□ -0.3
ABR-223ENST00000573895 ABCD3P28288 659 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 PIGAP37287 484 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 CRATP43155 626 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 DNASE1L1P49184 302 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 EMDP50402 254 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 SMSP52788 366 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 MVDP53602 400 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 MRPS35P82673 323 aaKnown RBP13.16□□□□□ -0.3
ABR-223ENST00000573895 HSF1Q00613 529 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 RBBP4Q09028 425 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 TRAP1Q12931 704 aaKnown RBP13.16□□□□□ -0.3
ABR-223ENST00000573895 BNIP2Q12982 314 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 DUSP8Q13202 625 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 CEACAM7Q14002 265 aa13.16□□□□□ -0.3
ABR-223ENST00000573895 SELPLGQ14242 412 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms