RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 ITPAQ9BY32 194 aa11.92□□□□□ -0.5
PRPF8-207ENST00000573681 GABARAPL3Q9BY60 117 aa11.92□□□□□ -0.5
PRPF8-207ENST00000573681 IRF2BPLQ9H1B7 796 aa11.92□□□□□ -0.5
PRPF8-207ENST00000573681 SEMA4GQ9NTN9 838 aa11.92□□□□□ -0.5
PRPF8-207ENST00000573681 C19orf25Q9UFG5 118 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-207ENST00000573681 KCNE5Q9UJ90 142 aa11.92□□□□□ -0.5
PRPF8-207ENST00000573681 SDK1Q7Z5N4 2213 aa11.92□□□□□ -0.5
PRPF8-207ENST00000573681 ARID1BQ8NFD5 2236 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-207ENST00000573681 IDSB3KWA1 339 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 PEX12O00623 359 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 TO15178 435 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 RFPL3O75679 317 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 GASTP01350 101 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 IGKV1D-16P01601 117 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 CCL4P13236 92 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 ENDOUP21128 410 aaKnown RBP11.91□□□□□ -0.5
PRPF8-207ENST00000573681 PI4KAP42356 2102 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 GPR143P51810 404 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 ESRRGP62508 458 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 SPEM2Q0P670 501 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 KCTD21Q4G0X4 260 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 ENTPD8Q5MY95 495 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 DCAF12Q5T6F0 453 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 ZNF691Q5VV52 312 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 MRPL14Q6P1L8 145 aaKnown RBP11.91□□□□□ -0.5
PRPF8-207ENST00000573681 PODNL1Q6PEZ8 512 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 RRM2BQ7LG56 351 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 ZNF550Q7Z398 422 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 APLFQ8IW19 511 aaPredicted RBP11.91□□□□□ -0.5
PRPF8-207ENST00000573681 ADIPOR1Q96A54 375 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 TP53INP1Q96A56 240 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 HSPBAP1Q96EW2 488 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 DGCR6LQ9BY27 220 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 UCK2Q9BZX2 261 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 ING2Q9H160 280 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 SOX17Q9H6I2 414 aaPredicted RBP11.91□□□□□ -0.5
PRPF8-207ENST00000573681 UBQLN4Q9NRR5 601 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 RLIMQ9NVW2 624 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 NDRG4Q9ULP0 352 aaKnown RBP11.91□□□□□ -0.5
PRPF8-207ENST00000573681 PPIEQ9UNP9 301 aaKnown RBP11.91□□□□□ -0.5
PRPF8-207ENST00000573681 DTX4Q9Y2E6 619 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 PCDHGB5Q9Y5G0 923 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 GMPPBQ9Y5P6 360 aa11.91□□□□□ -0.5
PRPF8-207ENST00000573681 COL6A3P12111 3177 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 CABIN1Q9Y6J0 2220 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TRBV4-1A0A0J9YWV2 114 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 C4orf47A7E2U8 309 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 C9J4A7 227 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 E9PQ18 207 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 AGRPO00253 132 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 BCKDKO14874 412 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 OR10H3O60404 316 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TPST2O60704 377 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 SEC24DO94855 1032 aaPredicted RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 CLIC3O95833 236 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 GSTM3P21266 225 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 SLC5A2P31639 672 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 POLR2IP36954 125 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 ADH7P40394 386 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 RFX3P48380 749 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 CLK3P49761 638 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 EFNA3P52797 238 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 ISL1P61371 349 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 RPP38P78345 283 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 FGFBP1Q14512 234 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 RBM48Q5RL73 367 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 MRPL2Q5T653 305 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 CDCP2Q5VXM1 449 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TMEM205Q6UW68 189 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 CD300LDQ6UXZ3 194 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 PLEKHM3Q6ZWE6 761 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 CPEB2Q7Z5Q1 589 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 ZNF440Q8IYI8 595 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 ZNF786Q8N393 782 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 ZNF321PQ8N8H1 164 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 ZNF527Q8NB42 609 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 AQP11Q8NBQ7 271 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 SLC7A13Q8TCU3 470 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 GNPDA2Q8TDQ7 276 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 HDAC2Q92769 488 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 DIO2Q92813 273 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 MR1Q95460 341 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 HRASLS5Q96KN8 279 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TAAR9Q96RI9 348 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 MRPS26Q9BYN8 205 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TRIM2Q9C040 744 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 SEMA4CQ9C0C4 833 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TMEM27Q9HBJ8 222 aa11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TUBA8Q9NY65 449 aaPredicted RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 TESQ9UGI8 421 aaKnown RBP11.9□□□□□ -0.5
PRPF8-207ENST00000573681 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
PRPF8-207ENST00000573681 NPIPA5A0A0B4J1W7 369 aa11.89□□□□□ -0.51
PRPF8-207ENST00000573681 TRAPPC13A5PLN9 417 aa11.89□□□□□ -0.51
PRPF8-207ENST00000573681 SERINC4A6NH21 518 aa11.89□□□□□ -0.51
PRPF8-207ENST00000573681 A6NHS1 94 aa11.89□□□□□ -0.51
PRPF8-207ENST00000573681 SAGE2PA6NJ88 616 aa11.89□□□□□ -0.51
PRPF8-207ENST00000573681 CPSF4LA6NMK7 179 aaKnown RBP11.89□□□□□ -0.51
PRPF8-207ENST00000573681 NPIPA7E9PJI5 369 aa11.89□□□□□ -0.51
PRPF8-207ENST00000573681 IGHEP01854 428 aa11.89□□□□□ -0.51
PRPF8-207ENST00000573681 NPIPA8P0DM63 369 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms