RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 FBXO30Q8TB52 745 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 FNDC9Q8TBE3 224 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 MBD6Q96DN6 1003 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 OTUB1Q96FW1 271 aaPredicted RBP16.31■□□□□ 0.2
CHD3-214ENST00000572579 C3orf30Q96M34 536 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 PIGMQ9H3S5 423 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 PPCSQ9HAB8 311 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 DLL4Q9NR61 685 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 PACSIN3Q9UKS6 424 aa16.31■□□□□ 0.2
CHD3-214ENST00000572579 TLDC2A0PJX2 215 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 SH3D21A4FU49 640 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 SLC22A20A6NK97 555 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 MSTNO14793 375 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 RGS14O43566 566 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 TNFRSF21O75509 655 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 AQP8O94778 261 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 DNASE1P24855 282 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 CCKARP32238 428 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 SLC6A8P48029 635 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 PRKAG1P54619 331 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 RPL38P63173 70 aaKnown RBP16.3■□□□□ 0.2
CHD3-214ENST00000572579 FOXD4Q12950 439 aaPredicted RBP16.3■□□□□ 0.2
CHD3-214ENST00000572579 DUSP5Q16690 384 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 GGNQ86UU5 652 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 KRTAP1-3Q8IUG1 177 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 NUP43Q8NFH3 380 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 GPR151Q8TDV0 419 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 WFIKKN1Q96NZ8 548 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 PINK1Q9BXM7 581 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 OPN3Q9H1Y3 402 aaPredicted RBP16.3■□□□□ 0.2
CHD3-214ENST00000572579 RNF122Q9H9V4 155 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 MKS1Q9NXB0 559 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 SH3BP4Q9P0V3 963 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 TRAF6Q9Y4K3 522 aa16.3■□□□□ 0.2
CHD3-214ENST00000572579 NIPBLQ6KC79 2804 aaeCLIP16.3■□□□□ 0.2
CHD3-214ENST00000572579 ALG1L2C9J202 215 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 H3BML4 177 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 PIP5K1BO14986 540 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 SEC14L5O43304 696 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 SPAG7O75391 227 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 KCNK2O95069 426 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 KLK2P20151 261 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 PSMA4P25789 261 aaKnown RBP16.29■□□□□ 0.2
CHD3-214ENST00000572579 CPA2P48052 419 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 GALNTL6Q49A17 601 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 MFSD12Q6NUT3 480 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 FIGNL1Q6PIW4 674 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 ZCCHC23Q6ZST2 131 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 OR6Y1Q8NGX8 325 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 ZNF524Q96C55 264 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 PGM2Q96G03 612 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 APOPT1Q96IL0 206 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 FAM111AQ96PZ2 611 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 ALPK1Q96QP1 1244 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 YIPF4Q9BSR8 244 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 TRMOQ9BU70 441 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 GSX1Q9H4S2 264 aaPredicted RBP16.29■□□□□ 0.2
CHD3-214ENST00000572579 SDHAF3Q9NRP4 125 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 ACSS1Q9NUB1 689 aaPredicted RBP16.29■□□□□ 0.2
CHD3-214ENST00000572579 TESMINQ9Y4I5 508 aa16.29■□□□□ 0.2
CHD3-214ENST00000572579 DEFB108AA8MXU0 73 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 OXSR1O95747 527 aaPredicted RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 OPN1LWP04000 364 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 CRHP06850 196 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 LAMP1P11279 417 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 CD53P19397 219 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 MANFP55145 182 aaKnown RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 VSNL1P62760 191 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 SIRPAP78324 504 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 C17orf67Q0P5P2 114 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 GANABQ14697 944 aaKnown RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 PON3Q15166 354 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 ZNHIT3Q15649 155 aaPredicted RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.28■□□□□ 0.2
CHD3-214ENST00000572579 GLYR1Q49A26 553 aaPredicted RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 XKR7Q5GH72 579 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 CCNJQ5T5M9 372 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 METTL25Q8N6Q8 603 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 CNEP1R1Q8N9A8 125 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 ZNF610Q8N9Z0 462 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 GATSQ8NAP1 163 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 OR7A2PQ8NGA2 310 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 POC1BQ8TC44 478 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 TWIST2Q8WVJ9 160 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 SLC9A6Q92581 669 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 FAM120BQ96EK7 910 aaKnown RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 ZBED6CLQ96FA7 236 aaPredicted RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 ADGRG7Q96K78 797 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 MARK4Q96L34 752 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 PIGQQ9BRB3 760 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 TBL1XR1Q9BZK7 514 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 ACBD3Q9H3P7 528 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 C6orf203Q9P0P8 240 aaPredicted RBP16.28■□□□□ 0.2
CHD3-214ENST00000572579 ATP6V1HQ9UI12 483 aa16.28■□□□□ 0.2
CHD3-214ENST00000572579 TTC36A6NLP5 189 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 NPHS1O60500 1241 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 SMNDC1O75940 238 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHD3-214ENST00000572579 RAF1P04049 648 aa16.27■□□□□ 0.2
CHD3-214ENST00000572579 NGFRP08138 427 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms