RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SLC6A18Q96N87 628 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 CD180Q99467 661 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GPA33Q99795 319 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 RHNO1Q9BSD3 238 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LMF2Q9BU23 707 aaKnown RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 LRRC61Q9BV99 259 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 NXF2Q9GZY0 626 aaKnown RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FAM60AQ9NP50 221 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 AMBNQ9NP70 447 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 FGF20Q9NP95 211 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ISYNA1Q9NPH2 558 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SEMA4GQ9NTN9 838 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM74BQ9NUR3 256 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 MED17Q9NVC6 651 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 C2orf42Q9NWW7 574 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GPR83Q9NYM4 423 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 IL20Q9NYY1 176 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 NLGN3Q9NZ94 848 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 MAT2BQ9NZL9 334 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SEMA5BQ9P283 1151 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 OSGIN1Q9UJX0 560 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 SLC6A14Q9UN76 642 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 PLCL2Q9UPR0 1127 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF443Q9Y2A4 671 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 GPR55Q9Y2T6 319 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-213ENST00000569687 WDR45Q9Y484 360 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 PCDHGA3Q9Y5H0 932 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 ATG2BQ96BY7 2078 aa5.01□□□□□ -1.61
SF3B3-213ENST00000569687 BRWD1Q9NSI6 2320 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PLXND1Q9Y4D7 1925 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 A0A1B0GVG6 124 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 CDHR4A6H8M9 788 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SLC9B1P1A6NJY1 282 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 FAM170BA6NMN3 283 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SNTNA6NMZ2 147 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 EFCAB9A8MZ26 197 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 CLDN25C9JDP6 229 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 NPIPB9F8W1W9 429 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 H0YIG0 161 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 H3BN98 237 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SGK494L7N484 410 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 AP3D1O14617 1153 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 HCRTR1O43613 425 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 FOXS1O43638 330 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 AIREO43918 545 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 KIAA0513O60268 411 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 COQ9O75208 318 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 NSA2O95478 260 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 FADS2O95864 444 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 CBX7O95931 251 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PTHP01270 115 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 THY1P04216 161 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SCG5P05408 212 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PROS1P07225 676 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 IGFBP1P08833 259 aaPredicted RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 ADORA3P0DMS8 318 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 RNH1P13489 461 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 NID1P14543 1247 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TYRP1P17643 537 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TNNI3P19429 210 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ENDOUP21128 410 aaKnown RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 NT5EP21589 574 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 DRD5P21918 477 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PSMB9P28065 219 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 POU1F1P28069 291 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TRHRP34981 398 aaPredicted RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 PTGER1P34995 402 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 CAPZBP47756 277 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SERPINB10P48595 397 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 RGS6P49758 472 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 GAS1P54826 345 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 MLLT10P55197 1068 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 C21orf59P57076 290 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 NXPH1P58417 271 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 HNRNPKP61978 463 aaKnown RBP eCLIP5□□□□□ -1.61
SF3B3-213ENST00000569687 POU6F2P78424 691 aaPredicted RBP5□□□□□ -1.61
SF3B3-213ENST00000569687 OCA2Q04671 838 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 PRKCDQ05655 676 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 KHDRBS1Q07666 443 aaKnown RBP eCLIP5□□□□□ -1.61
SF3B3-213ENST00000569687 C1orf61Q13536 156 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF846Q147U1 533 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 MAPK14Q16539 360 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM44Q2T9K0 475 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SYT14P1Q58G82 188 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ARMCX4Q5H9R4 360 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TCTE1Q5JU00 501 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SLC27A4Q6P1M0 643 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TUBA3EQ6PEY2 450 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SLC36A4Q6YBV0 504 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF730Q6ZMV8 503 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 OLIG3Q7RTU3 272 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 GDF7Q7Z4P5 450 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 KIF18BQ86Y91 864 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 UBALD2Q8IYN6 164 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TMEFF1Q8IYR6 380 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 SPEM1Q8N4L4 309 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 NANOGP1Q8N7R0 232 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 FRMD1Q8N878 549 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 TCEANCQ8N8B7 351 aa5□□□□□ -1.61
SF3B3-213ENST00000569687 C19orf47Q8N9M1 422 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms