RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 PPP3R2Q96LZ3 170 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 PIGQQ9BRB3 760 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 MECRQ9BV79 373 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 CXXC4Q9H2H0 198 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 MED13LQ71F56 2210 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 AKAP9Q99996 3911 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 A0A1W2PNV4 684 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 OR2M5A3KFT3 312 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 SLC22A20A6NK97 555 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 TMEM114B3SHH9 223 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 EMC8O43402 210 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 TNFRSF21O75509 655 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 RPL3P39023 403 aaKnown RBP17.94■□□□□ 0.46
CLN6-206ENST00000565471 PCYT1AP49585 367 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 PRKAG1P54619 331 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 CLDN15P56746 228 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 RIPPLY3P57055 190 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 OCRLQ01968 901 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 MLC1Q15049 377 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLN6-206ENST00000565471 XKR7Q5GH72 579 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 MFSD12Q6NUT3 480 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 EMBQ6PCB8 327 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 APOOLQ6UXV4 268 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 P4HA3Q7Z4N8 544 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 LUZP2Q86TE4 346 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 UBQLNLQ8IYU4 475 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 OR6Y1Q8NGX8 325 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 AENQ8WTP8 325 aaKnown RBP17.94■□□□□ 0.46
CLN6-206ENST00000565471 DACH2Q96NX9 599 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 LIME1Q9H400 295 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 ATP6V1HQ9UI12 483 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 ZNF337Q9Y3M9 751 aa17.94■□□□□ 0.46
CLN6-206ENST00000565471 A8MXE2 369 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 ALG1L2C9J202 215 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 MSTNO14793 375 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 SCAMP2O15127 329 aaKnown RBP17.93■□□□□ 0.46
CLN6-206ENST00000565471 SPAG7O75391 227 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 ACP2P11117 423 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 LCN1P31025 176 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 HPCAL1P37235 193 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 SUCLG1P53597 346 aaKnown RBP17.93■□□□□ 0.46
CLN6-206ENST00000565471 TMEM44Q2T9K0 475 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 EXOSC6Q5RKV6 272 aaKnown RBP17.93■□□□□ 0.46
CLN6-206ENST00000565471 SZRD1Q7Z422 152 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 EXOC3L1Q86VI1 746 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 SLC16A11Q8NCK7 471 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 FAM110BQ8TC76 370 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 SLC9A6Q92581 669 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 CCM2LQ9NUG4 571 aaPredicted RBP17.93■□□□□ 0.46
CLN6-206ENST00000565471 ZNF175Q9Y473 711 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 AP4B1Q9Y6B7 739 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 MPDZO75970 2070 aa17.93■□□□□ 0.46
CLN6-206ENST00000565471 H3BML4 177 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 OXSR1O95747 527 aaPredicted RBP17.92■□□□□ 0.46
CLN6-206ENST00000565471 TBXA2RP21731 343 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 DNASE1P24855 282 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 DUSP5Q16690 384 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 ZCCHC23Q6ZST2 131 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 METTL25Q8N6Q8 603 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 OR4C3Q8NH37 302 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 CAVIN3Q969G5 261 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 SIRT3Q9NTG7 399 aaPredicted RBP17.92■□□□□ 0.46
CLN6-206ENST00000565471 PCNX3Q9H6A9 2034 aa17.92■□□□□ 0.46
CLN6-206ENST00000565471 A0A087WZY1 265 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 SEC14L5O43304 696 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 NDUFB5O43674 189 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 LYPLA1O75608 230 aaPredicted RBP17.91■□□□□ 0.46
CLN6-206ENST00000565471 KCNK2O95069 426 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 HSPA4LO95757 839 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 ALOX5P09917 674 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 ZNF17P17021 662 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 ARRB2P32121 409 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 SERPINB4P48594 390 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 PRIM2P49643 509 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 RPS3AP61247 264 aaKnown RBP17.91■□□□□ 0.46
CLN6-206ENST00000565471 FGFBP1Q14512 234 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 ATP6AP1LQ52LC2 224 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 FBXW10Q5XX13 1052 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 WDR93Q6P2C0 686 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 PAMR1Q6UXH9 720 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 NATD1Q8N6N6 113 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 OR5M1Q8NGP8 315 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 FBXO30Q8TB52 745 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 AGR3Q8TD06 166 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 FIG4Q92562 907 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 STARD4Q96DR4 205 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 FAM120BQ96EK7 910 aaKnown RBP17.91■□□□□ 0.46
CLN6-206ENST00000565471 YIPF4Q9BSR8 244 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 TMEM109Q9BVC6 243 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 PINK1Q9BXM7 581 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 RNF122Q9H9V4 155 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 STOML1Q9UBI4 398 aa17.91■□□□□ 0.46
CLN6-206ENST00000565471 AKAP6Q13023 2319 aa17.9■□□□□ 0.46
CLN6-206ENST00000565471 SH3D21A4FU49 640 aa17.9■□□□□ 0.46
CLN6-206ENST00000565471 H0YC42 278 aa17.9■□□□□ 0.46
CLN6-206ENST00000565471 PEX11AO75192 247 aa17.9■□□□□ 0.46
CLN6-206ENST00000565471 BPGMP07738 259 aa17.9■□□□□ 0.46
CLN6-206ENST00000565471 TPD52P55327 224 aaPredicted RBP17.9■□□□□ 0.46
CLN6-206ENST00000565471 CLDN20P56880 219 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms