RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF721Q8TF20 911 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 HDAC2Q92769 488 aaKnown RBP14.41□□□□□ -0.1
COMMD4-210ENST00000564587 LCORQ96JN0 433 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-210ENST00000564587 MCHR1Q99705 422 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 CMKLR1Q99788 373 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 FUZQ9BT04 418 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 ITPAQ9BY32 194 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 OR8D2Q9GZM6 311 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 WDR54Q9H977 334 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 KRCC1Q9NPI7 259 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-210ENST00000564587 TMEM9BQ9NQ34 198 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 SLC22A11Q9NSA0 550 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 RXFP3Q9NSD7 469 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 OCIAD1Q9NX40 245 aa14.41□□□□□ -0.1
COMMD4-210ENST00000564587 C19orf25Q9UFG5 118 aaPredicted RBP14.41□□□□□ -0.1
COMMD4-210ENST00000564587 TESQ9UGI8 421 aaKnown RBP14.41□□□□□ -0.1
COMMD4-210ENST00000564587 NDRG4Q9ULP0 352 aaKnown RBP14.41□□□□□ -0.1
COMMD4-210ENST00000564587 ASCC3Q8N3C0 2202 aaKnown RBP14.4□□□□□ -0.1
COMMD4-210ENST00000564587 A0A087WXM4 84 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 TRBV4-1A0A0J9YWV2 114 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 CDHR4A6H8M9 788 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 A6NHS1 94 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 E9PQ18 207 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 MEN1O00255 615 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 OR10H3O60404 316 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 SEMA7AO75326 666 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 CLPTM1O96005 669 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 GSTM3P21266 225 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 RAB15P59190 212 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 CSNK2BP67870 215 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 NPTX1Q15818 432 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 MRPL2Q5T653 305 aaKnown RBP14.4□□□□□ -0.1
COMMD4-210ENST00000564587 ANKRD34AQ69YU3 496 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 ZNF770Q6IQ21 691 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-210ENST00000564587 CD300LDQ6UXZ3 194 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 PLEKHM3Q6ZWE6 761 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 RRM2BQ7LG56 351 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 SLC29A4Q7RTT9 530 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 ZNF550Q7Z398 422 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 COMTD1Q86VU5 262 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 NAXDQ8IW45 347 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 ZNF440Q8IYI8 595 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 DEPDC4Q8N2C3 294 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 BCORP1Q8N888 145 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 ZNF527Q8NB42 609 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 AQP11Q8NBQ7 271 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 TSPAN14Q8NG11 270 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 OR1N1Q8NGS0 311 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 HSPBAP1Q96EW2 488 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 HRASLS5Q96KN8 279 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 PRRX2Q99811 253 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 ZNF559Q9BR84 538 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 ZPBPQ9BS86 351 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 UCK2Q9BZX2 261 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 SOX17Q9H6I2 414 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-210ENST00000564587 NDUFA13Q9P0J0 144 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 RHCGQ9UBD6 479 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 CTSFQ9UBX1 484 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 GPN3Q9UHW5 284 aaPredicted RBP14.4□□□□□ -0.1
COMMD4-210ENST00000564587 CHST2Q9Y4C5 530 aa14.4□□□□□ -0.1
COMMD4-210ENST00000564587 C2orf92A0A1B0GVN3 265 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 TRIM64A6NGJ6 449 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 A8MUA0 341 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 NPIPB9F8W1W9 429 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 TO15178 435 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 LRP3O75074 770 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 ALOX12BO75342 701 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 SEC24DO94855 1032 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-210ENST00000564587 TIAF1O95411 115 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 IL33O95760 270 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 CLIC3O95833 236 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 CD59P13987 128 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 ENDOUP21128 410 aaKnown RBP14.39□□□□□ -0.11
COMMD4-210ENST00000564587 RPL5P46777 297 aaKnown RBP14.39□□□□□ -0.11
COMMD4-210ENST00000564587 EMP2P54851 167 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 CXCR4P61073 352 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 ISL1P61371 349 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 RPP38P78345 283 aaKnown RBP14.39□□□□□ -0.11
COMMD4-210ENST00000564587 MAPK14Q16539 360 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 ENTPD8Q5MY95 495 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 PODNL1Q6PEZ8 512 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 B3GNT8Q7Z7M8 397 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 SLC38A9Q8NBW4 561 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 OR9Q2Q8NGE9 314 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 SLC7A13Q8TCU3 470 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 FBLIM1Q8WUP2 373 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 DIO2Q92813 273 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 WFDC6Q9BQY6 131 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 FBXO34Q9NWN3 711 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 SLC35A3Q9Y2D2 325 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 DTX4Q9Y2E6 619 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 PCDHGB5Q9Y5G0 923 aa14.39□□□□□ -0.11
COMMD4-210ENST00000564587 ZFHX2Q9C0A1 2572 aaPredicted RBP14.39□□□□□ -0.11
COMMD4-210ENST00000564587 TRAPPC13A5PLN9 417 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 IDSB3KWA1 339 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 C9J4A7 227 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 PEX12O00623 359 aa14.38□□□□□ -0.11
COMMD4-210ENST00000564587 CDX4O14627 284 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-210ENST00000564587 FOXD2O60548 495 aaPredicted RBP14.38□□□□□ -0.11
COMMD4-210ENST00000564587 SMNDC1O75940 238 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms