RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 OR4N2Q8NGD1 307 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 OR5L2Q8NGL0 311 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 OR4C15Q8NGM1 316 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-205ENST00000562310 PHF10Q8WUB8 498 aaKnown RBP13.2□□□□□ -0.3
COMMD4-205ENST00000562310 ZG16BQ96DA0 208 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 WDR77Q9BQA1 342 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-205ENST00000562310 PSD2Q9BQI7 771 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 RSPO3Q9BXY4 272 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-205ENST00000562310 SPRY4Q9C004 299 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF700Q9H0M5 742 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 AKIRIN1Q9H9L7 192 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-205ENST00000562310 RYDENQ9NUL5 291 aaKnown RBP13.2□□□□□ -0.3
COMMD4-205ENST00000562310 FBXO34Q9NWN3 711 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 U3KQV3 271 aa13.2□□□□□ -0.3
COMMD4-205ENST00000562310 IGHV3-20A0A0C4DH32 117 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 TEX51A0A1B0GUA7 166 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 A0A1W2PNU3 283 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-205ENST00000562310 CDHR4A6H8M9 788 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 C21orf140B9A014 251 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 PEX12O00623 359 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 HS6ST1O60243 411 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 FMO6PO60774 539 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 OXSR1O95747 527 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-205ENST00000562310 H1F0P07305 194 aaKnown RBP13.19□□□□□ -0.3
COMMD4-205ENST00000562310 UMODP07911 640 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 CDH2P19022 906 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-205ENST00000562310 CD82P27701 267 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 IL12BP29460 328 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 LIMS1P48059 325 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 RFX3P48380 749 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 HMGA2P52926 109 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 RAD23AP54725 363 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 NRG3P56975 720 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 RNF4P78317 190 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 EXT1Q16394 746 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 MAPK14Q16539 360 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 MRPL2Q5T653 305 aaKnown RBP13.19□□□□□ -0.3
COMMD4-205ENST00000562310 TMEM179BQ7Z7N9 219 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 HMGN2P46Q86SG4 172 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 ZAR1Q86SH2 424 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 COMTD1Q86VU5 262 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 GRAMD2AQ8IUY3 354 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 LACC1Q8IV20 430 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 OFCC1Q8IZS5 231 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 ZSCAN1Q8NBB4 408 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 APCDD1LQ8NCL9 501 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 OR4D11Q8NGI4 311 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 OR6T1Q8NGN1 323 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 CT55Q8WUE5 264 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 DIO2Q92813 273 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 ANKRD19PQ9H560 264 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 ACER3Q9NUN7 267 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 PDP1Q9P0J1 537 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-205ENST00000562310 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 TESQ9UGI8 421 aaKnown RBP13.19□□□□□ -0.3
COMMD4-205ENST00000562310 TMCC3Q9ULS5 477 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 AP4B1Q9Y6B7 739 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 AK5Q9Y6K8 562 aa13.19□□□□□ -0.3
COMMD4-205ENST00000562310 SDK2Q58EX2 2172 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 EXPH5Q8NEV8 1989 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NPIPA5A0A0B4J1W7 369 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 TRBV11-1A0A0K0K1C0 115 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 A0A1W2PRQ8 180 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 C7orf72A4D263 438 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 PMS2P1A4D2B8 440 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NPIPA7E9PJI5 369 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 J3KTA2 159 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 FAAHO00519 579 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 DENRO43583 198 aaKnown RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 SEC24DO94855 1032 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 TNFSF15O95150 251 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NGFRP08138 427 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NPIPA8P0DM63 369 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 THRBP10828 461 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 ANXA8P13928 327 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 ENDOUP21128 410 aaKnown RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 MMP11P24347 488 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NR0B1P51843 470 aaKnown RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 FOXL2P58012 376 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 RPS15P62841 145 aaKnown RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 MED21Q13503 144 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 DGCR6Q14129 220 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 FGFBP1Q14512 234 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
COMMD4-205ENST00000562310 PCOLCEQ15113 449 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NPTX1Q15818 432 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 EXOC3L2Q2M3D2 409 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 PDZK1Q5T2W1 519 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 FAHD1Q6P587 224 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 TBPL2Q6SJ96 375 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF440Q8IYI8 595 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
COMMD4-205ENST00000562310 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms