RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 RHCGQ9UBD6 479 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 GSTK1Q9Y2Q3 226 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 CHST2Q9Y4C5 530 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 NPTNQ9Y639 398 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 PLSCR5A0PG75 271 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 CTSLP07711 333 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 GPX2P18283 190 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 PTAFRP25105 342 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 SSTP61278 116 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 MELKQ14680 651 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 RBMS2Q15434 407 aaKnown RBP12.47□□□□□ -0.41
CLK3-206ENST00000562078 FAM78AQ5JUQ0 283 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 CEACAM20Q6UY09 585 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 Q6ZVL8 140 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 GPR135Q8IZ08 494 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 LRRC3BQ96PB8 259 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 ARL15Q9NXU5 204 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 BTNL2Q9UIR0 455 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 PRKAB1Q9Y478 270 aa12.47□□□□□ -0.41
CLK3-206ENST00000562078 ANKDD1BA6NHY2 528 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 UPK3BL1B0FP48 263 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 UPK3BL2E5RIL1 263 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
CLK3-206ENST00000562078 CPSF4O95639 269 aaKnown RBP12.46□□□□□ -0.41
CLK3-206ENST00000562078 SOD1P00441 154 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 CBSLP0DN79 551 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 AOAHP28039 575 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 CBSP35520 551 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 CTSCP53634 463 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 CASP9P55211 416 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 SIM1P81133 766 aaPredicted RBP12.46□□□□□ -0.41
CLK3-206ENST00000562078 HLXQ14774 488 aaPredicted RBP12.46□□□□□ -0.41
CLK3-206ENST00000562078 ZDHHC20Q5W0Z9 365 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 SLC25A25Q6KCM7 469 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 VRK3Q8IV63 474 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 SYNPOQ8N3V7 929 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 EIF4E3Q8N5X7 224 aaKnown RBP12.46□□□□□ -0.41
CLK3-206ENST00000562078 SMARCD2Q92925 531 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 TCEAL3Q969E4 200 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 RSPRY1Q96DX4 576 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 ELP4Q96EB1 424 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 WDR89Q96FK6 387 aaPredicted RBP12.46□□□□□ -0.41
CLK3-206ENST00000562078 FCRL1Q96LA6 429 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 ASB16Q96NS5 453 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 RDH14Q9HBH5 336 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 MARK1Q9P0L2 795 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 SEC14L3Q9UDX4 400 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 MKL2Q9ULH7 1088 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 ASB4Q9Y574 426 aa12.46□□□□□ -0.41
CLK3-206ENST00000562078 XIRP2A4UGR9 3374 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 EFCAB7A8K855 629 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 RASGRP1O95267 797 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 PAPLNO95428 1278 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 TFP02787 698 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 ANXA5P08758 320 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 ATP1B2P14415 290 aaPredicted RBP12.46□□□□□ -0.42
CLK3-206ENST00000562078 EPB42P16452 691 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 DRD5P21918 477 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 RPIAP49247 311 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 UBE2R2Q712K3 238 aaPredicted RBP12.46□□□□□ -0.42
CLK3-206ENST00000562078 CBLN2Q8IUK8 224 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 PDZD9Q8IXQ8 264 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 CLECL1Q8IZS7 167 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 C12orf45Q8N5I9 185 aaPredicted RBP12.46□□□□□ -0.42
CLK3-206ENST00000562078 CACNG6Q9BXT2 260 aa12.46□□□□□ -0.42
CLK3-206ENST00000562078 RPL36Q9Y3U8 105 aaKnown RBP12.46□□□□□ -0.42
CLK3-206ENST00000562078 DENND4AQ7Z401 1863 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 MUC22E2RYF6 1773 aaPredicted RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 OR2W5A6NFC9 320 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 MAGEB17A8MXT2 336 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 ZNF593O00488 134 aaPredicted RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 STK16O75716 305 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 POP7O75817 140 aaKnown RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 DHCR24Q15392 516 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 SLC36A2Q495M3 483 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 MZT2AQ6P582 158 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 Q6ZTK2 550 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 KRT77Q7Z794 578 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 C12orf40Q86WS4 652 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 TCEANCQ8N8B7 351 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 OR52I1Q8NGK6 324 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 NELL1Q92832 810 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 OTULINQ96BN8 352 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 PTDSS2Q9BVG9 487 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 TMED9Q9BVK6 235 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 EQTNQ9NQ60 294 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 SDHAF3Q9NRP4 125 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 NKIRAS2Q9NYR9 191 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 MIOXQ9UGB7 285 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 IL36AQ9UHA7 158 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 C2orf92A0A1B0GVN3 265 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 LOC730098B7Z3J9 87 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 STK25O00506 426 aa12.45□□□□□ -0.42
CLK3-206ENST00000562078 EIF4EP06730 217 aaKnown RBP12.45□□□□□ -0.42
CLK3-206ENST00000562078 RNF224P0DH78 156 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms