RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 DUSP26Q9BV47 211 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 TBL1XR1Q9BZK7 514 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 RTN4RQ9BZR6 473 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 UBQLN3Q9H347 655 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 CXorf36Q9H7Y0 433 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 ACKR4Q9NPB9 350 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 QPCTLQ9NXS2 382 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 Q9UFV3 132 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 ATP6V1HQ9UI12 483 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 ACTL7BQ9Y614 415 aa10.92□□□□□ -0.66
TPM1-216ENST00000558910 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 B4DXG7 233 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 H0Y3Z8 333 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 WDR1O75083 606 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 CBR3O75828 277 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 OPN1LWP04000 364 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 HMGN2P05204 90 aaKnown RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 BMP5P22003 454 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 ELAVL4P26378 380 aaKnown RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 DPP4P27487 766 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 CHRNB4P30926 498 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 GCKP35557 465 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 CCT3P49368 545 aaKnown RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 EMX2Q04743 252 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 CYP27C1Q4G0S4 372 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 TNFAIP8L3Q5GJ75 292 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 RAET1LQ5VY80 246 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 MFSD12Q6NUT3 480 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 RNF165Q6ZSG1 346 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 IFNEQ86WN2 208 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 LIX1LQ8IVB5 337 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 ZNF614Q8N883 585 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 OR4A15Q8NGL6 344 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 ASB5Q8WWX0 329 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 GIMAP5Q96F15 307 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 MS4A4EQ96PG1 132 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 PRPF18Q99633 342 aaKnown RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 LMF2Q9BU23 707 aaKnown RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 DPY30Q9C005 99 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 WDR55Q9H6Y2 383 aaPredicted RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 CHST11Q9NPF2 352 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 KCNJ16Q9NPI9 418 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 SIRT3Q9NTG7 399 aaPredicted RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 ATAD3AQ9NVI7 634 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 MRTO4Q9UKD2 239 aaKnown RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 ZNF232Q9UNY5 417 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 KLF2Q9Y5W3 355 aaPredicted RBP10.91□□□□□ -0.66
TPM1-216ENST00000558910 KCNE3Q9Y6H6 103 aa10.91□□□□□ -0.66
TPM1-216ENST00000558910 EXPH5Q8NEV8 1989 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 PKDREJQ9NTG1 2253 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 SEC14L5O43304 696 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 SLITRK5O94991 958 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 PSMG1O95456 288 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 IL33O95760 270 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 ANGPTL1O95841 491 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 HPGDP15428 266 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 DDX5P17844 614 aaKnown RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 PRPS1L1P21108 318 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 EPHA3P29320 983 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 RPL3P39023 403 aaKnown RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 ZFP36L2P47974 494 aaKnown RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 CLK3P49761 638 aaKnown RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 PSMD4P55036 377 aaKnown RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 POU6F2P78424 691 aaPredicted RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 PRR5P85299 388 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 MAD2L1Q13257 205 aaPredicted RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 SNTA1Q13424 505 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 VPS26BQ4G0F5 336 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 ACSF3Q4G176 576 aaPredicted RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 VASNQ6EMK4 673 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 APOOLQ6UXV4 268 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 CDRT4Q8N9R6 151 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 OR5D16Q8NGK9 328 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 RFWD2Q8NHY2 731 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 ADAMTS15Q8TE58 950 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 OR5P2Q8WZ92 322 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 MTERF3Q96E29 417 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 WDYHV1Q96HA8 205 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 ACSS1Q9NUB1 689 aaPredicted RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 FAF1Q9UNN5 650 aaPredicted RBP10.9□□□□□ -0.66
TPM1-216ENST00000558910 VDAC3Q9Y277 283 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 ABCA12Q86UK0 2595 aa10.9□□□□□ -0.66
TPM1-216ENST00000558910 ADGRG4Q8IZF6 3080 aa10.9□□□□□ -0.67
TPM1-216ENST00000558910 NCOA6Q14686 2063 aaPredicted RBP10.89□□□□□ -0.67
TPM1-216ENST00000558910 CACNA1CQ13936 2221 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 H0YC42 278 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 H3BML4 177 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 FADS1O60427 444 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 TBX19O60806 448 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 KCNK2O95069 426 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 NKX2-2O95096 273 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 GABRA1P14867 456 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 LBPP18428 481 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 UQCRC1P31930 480 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 PRIM2P49643 509 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 DGKQP52824 942 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 GAS1P54826 345 aa10.89□□□□□ -0.67
TPM1-216ENST00000558910 TPD52P55327 224 aaPredicted RBP10.89□□□□□ -0.67
TPM1-216ENST00000558910 CLDN8P56748 225 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms