RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CTPS2Q9NRF8 586 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 FGF21Q9NSA1 209 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
SMAD3-207ENST00000558763 NTNG1Q9Y2I2 539 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 IFT52Q9Y366 437 aa12.01□□□□□ -0.49
SMAD3-207ENST00000558763 NPIPA5A0A0B4J1W7 369 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 ZAR1LA6NP61 321 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 NPIPA7E9PJI5 369 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 H3BSA7 217 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 CLDN4O14493 209 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 TM4SF5O14894 197 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 ABCB7O75027 752 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 KCNK2O95069 426 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 NTN1O95631 604 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 NPIPA8P0DM63 369 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 CSRP1P21291 193 aaKnown RBP12□□□□□ -0.49
SMAD3-207ENST00000558763 CHMP24386 653 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 CSTF2P33240 577 aaKnown RBP eCLIP12□□□□□ -0.49
SMAD3-207ENST00000558763 GABRA3P34903 492 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 GSSP48637 474 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 HOXC5Q00444 222 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF155Q12901 538 aaPredicted RBP12□□□□□ -0.49
SMAD3-207ENST00000558763 PMS2P3Q13401 168 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 GPR68Q15743 365 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 KCTD8Q6ZWB6 473 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 ZER1Q7Z7L7 766 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 LSRQ86X29 649 aaPredicted RBP12□□□□□ -0.49
SMAD3-207ENST00000558763 SPARTQ8N0X7 666 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF615Q8N8J6 731 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 OR4N2Q8NGD1 307 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 GPR151Q8TDV0 419 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 DGCR14Q96DF8 476 aaKnown RBP12□□□□□ -0.49
SMAD3-207ENST00000558763 OR6C1Q96RD1 312 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 DUSP21Q9H596 190 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF226Q9NYT6 803 aa12□□□□□ -0.49
SMAD3-207ENST00000558763 CNOT1A5YKK6 2376 aaKnown RBP12□□□□□ -0.49
SMAD3-207ENST00000558763 AK1P00568 194 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 IGFBP1P08833 259 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 CT45A8P0DMV1 189 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 CT45A9P0DMV2 189 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 NID1P14543 1247 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 PCMT1P22061 227 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 GALNSP34059 522 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 SMIM11AP58511 58 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 POU6F2P78424 691 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 TOP3AQ13472 1001 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 DSG2Q14126 1118 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 CT45A2Q5DJT8 189 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 HES3Q5TGS1 186 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 GTF2IRD2BQ6EKJ0 949 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 GTF2IRD2Q86UP8 949 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 PEX5LQ8IYB4 626 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 BPIFB6Q8NFQ5 453 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 OR4K5Q8NGD3 323 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 RHOXF1Q8NHV9 184 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 RBM18Q96H35 190 aaKnown RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 DGAT2Q96PD7 388 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 OR1F2PQ96R84 312 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 FNDC11Q9BVV2 318 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 POLR1BQ9H9Y6 1135 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 TMCC3Q9ULS5 477 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 MGAT4BQ9UQ53 548 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 ERVK-19Q9WJR5 959 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 DCHS1Q96JQ0 3298 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 A0A087WUU8 490 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 CDHR4A6H8M9 788 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 EFCAB7A8K855 629 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 M0R129 80 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 SLC30A4O14863 429 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 DSCR3O14972 297 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 OR10H3O60404 316 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 CSO75390 466 aaKnown RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 GUSBP08236 651 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 PRG2P13727 222 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 MMP11P24347 488 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 RGS8P57771 180 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 ESRRGP62508 458 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 TRA2AQ13595 282 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF267Q14586 743 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 RAB39AQ14964 217 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 PTGES3Q15185 160 aaKnown RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 ISXQ2M1V0 245 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 BROXQ5VW32 411 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 CD300LDQ6UXZ3 194 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 AGBL5Q8NDL9 886 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 C16orf52Q8NHV5 167 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 PTPMT1Q8WUK0 201 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 TSLPQ969D9 159 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF556Q9HAH1 456 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 FANCEQ9HB96 536 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 POLE3Q9NRF9 147 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 RASSF1Q9NS23 344 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 SIDT1Q9NXL6 827 aaKnown RBP11.99□□□□□ -0.49
SMAD3-207ENST00000558763 NDOR1Q9UHB4 597 aa11.99□□□□□ -0.49
SMAD3-207ENST00000558763 CPSF4LA6NMK7 179 aaKnown RBP11.98□□□□□ -0.49
SMAD3-207ENST00000558763 NPIPB9F8W1W9 429 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms