RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 VDAC3Q9Y277 283 aa10.78□□□□□ -0.68
HERC1-202ENST00000558324 MRPS18CQ9Y3D5 142 aaKnown RBP10.78□□□□□ -0.68
HERC1-202ENST00000558324 POLQO75417 2590 aa10.77□□□□□ -0.68
HERC1-202ENST00000558324 A0A1W2PRB8 838 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 TUBAL3A6NHL2 446 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 SLC22A20A6NK97 555 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 TTC36A6NLP5 189 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 RGS16O15492 202 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 KCNK2O95069 426 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 RCBTB2O95199 551 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 OXSR1O95747 527 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 IL18BPO95998 194 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 ALOX5P09917 674 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 LAMP1P11279 417 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 PEPDP12955 493 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 DDX5P17844 614 aaKnown RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 SERPINB5P36952 375 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 PEX19P40855 299 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 ETV4P43268 484 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 SERPINB4P48594 390 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 RNF144AP50876 292 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 PRR5P85299 388 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 C17orf67Q0P5P2 114 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 GANABQ14697 944 aaKnown RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 LASP1Q14847 261 aaKnown RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 CHI3L2Q15782 390 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 PDCD2Q16342 344 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 C6orf136Q5SQH8 315 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 CCNJQ5T5M9 372 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 IL23RQ5VWK5 629 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 FBXW10Q5XX13 1052 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 LRIG3Q6UXM1 1119 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 ADGRE4PQ86SQ3 457 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 KIF18BQ86Y91 864 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 NUDCD3Q8IVD9 361 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 MREGQ8N565 214 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 MEIOBQ8N635 442 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 COX18Q8N8Q8 333 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 OR4C3Q8NH37 302 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 LINC01560Q8TB33 94 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 FAM222BQ8WU58 562 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 HOXB13Q92826 284 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 FAM120BQ96EK7 910 aaKnown RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 C1GALT1C1Q96EU7 318 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 ZFP3Q96NJ6 502 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 RBM24Q9BX46 236 aaKnown RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 ZNF395Q9H8N7 513 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 SIRT3Q9NTG7 399 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 FBXO34Q9NWN3 711 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 GALNT8Q9NY28 637 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 ATP6V1HQ9UI12 483 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 FOXD3Q9UJU5 478 aaPredicted RBP10.77□□□□□ -0.69
HERC1-202ENST00000558324 ZNF337Q9Y3M9 751 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 MED12Q93074 2177 aa10.77□□□□□ -0.69
HERC1-202ENST00000558324 OR2M5A3KFT3 312 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 A6NNC1 897 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 CTIFO43310 598 aaKnown RBP10.76□□□□□ -0.69
HERC1-202ENST00000558324 HCRTR2O43614 444 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 NDUFB5O43674 189 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 ITM2AO43736 263 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 SMNDC1O75940 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
HERC1-202ENST00000558324 C6orf47O95873 294 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 HMGN2P05204 90 aaKnown RBP10.76□□□□□ -0.69
HERC1-202ENST00000558324 HPGDP15428 266 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 DNAJA1P31689 397 aaKnown RBP10.76□□□□□ -0.69
HERC1-202ENST00000558324 RPL3P39023 403 aaKnown RBP10.76□□□□□ -0.69
HERC1-202ENST00000558324 MAP3K8P41279 467 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 PRIM2P49643 509 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 ART1P52961 327 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 SUCLG1P53597 346 aaKnown RBP10.76□□□□□ -0.69
HERC1-202ENST00000558324 CLDN15P56746 228 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 CLDN20P56880 219 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 SIRPAP78324 504 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 TP53BP2Q13625 1128 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 BCL2A1Q16548 175 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 SPDYE7PQ495Y7 208 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 CPTPQ5TA50 214 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 PPP4R4Q6NUP7 873 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 HOMEZQ8IX15 550 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 CNEP1R1Q8N9A8 125 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 FIG4Q92562 907 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 CDS1Q92903 461 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 SH3YL1Q96HL8 342 aaPredicted RBP10.76□□□□□ -0.69
HERC1-202ENST00000558324 ZNF845Q96IR2 970 aaPredicted RBP10.76□□□□□ -0.69
HERC1-202ENST00000558324 PIGQQ9BRB3 760 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 TMEM109Q9BVC6 243 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 PINK1Q9BXM7 581 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 ACBD3Q9H3P7 528 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 LIME1Q9H400 295 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 RASSF1Q9NS23 344 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 GIN1Q9NXP7 522 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 JKAMPQ9P055 326 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 NTMQ9P121 344 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 AKAP9Q99996 3911 aa10.76□□□□□ -0.69
HERC1-202ENST00000558324 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.75□□□□□ -0.69
HERC1-202ENST00000558324 NPIPA5A0A0B4J1W7 369 aa10.75□□□□□ -0.69
HERC1-202ENST00000558324 A0A1W2PNV4 684 aa10.75□□□□□ -0.69
HERC1-202ENST00000558324 ALG1L2C9J202 215 aa10.75□□□□□ -0.69
HERC1-202ENST00000558324 NPIPA7E9PJI5 369 aa10.75□□□□□ -0.69
HERC1-202ENST00000558324 CFLARO15519 480 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms