RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ATP6V1B2P21281 511 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 EVI2BP34910 448 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 SOX18P35713 384 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 CYB561P49447 251 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 ATP12AP54707 1039 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 PCBP3P57721 371 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 MLF1P58340 268 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 ACTR3P61158 418 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 CHRNEQ04844 493 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 FUT5Q11128 374 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 KPNB1Q14974 876 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 IFI44LQ53G44 452 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 TBCELQ5QJ74 424 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 RNF220Q5VTB9 566 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 ISLR2Q6UXK2 745 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 RTL4Q6ZR62 310 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 CBLL1Q75N03 491 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 EIF3MQ7L2H7 374 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 GALNT10Q86SR1 603 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF440Q8IYI8 595 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 CYP4Z2PQ8N1L4 340 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 C10orf111Q8N326 155 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 OR5M3Q8NGP4 307 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 APOBEC4Q8WW27 367 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 SGCZQ96LD1 299 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 SECISBP2Q96T21 854 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 DOHHQ9BU89 302 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 SLC38A1Q9H2H9 487 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 MAGIXQ9H6Y5 334 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 ZBTB20Q9HC78 741 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 TIMMDC1Q9NPL8 285 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 DCAF13Q9NV06 445 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 OLAHQ9NV23 265 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 USP22Q9UPT9 525 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 FAM32AQ9Y421 112 aaKnown RBP10.32□□□□□ -0.76
SHMT2-220ENST00000555634 V9GYQ6 96 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 SPTBN2O15020 2390 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 NINQ8N4C6 2090 aa10.32□□□□□ -0.76
SHMT2-220ENST00000555634 CEP295Q9C0D2 2601 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 PRAMEF25A6NGN4 478 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 A6NL46 340 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 M0QX08 132 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 SYT5O00445 386 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 ACOT8O14734 319 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 NDUFB5O43674 189 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 PRKNO60260 465 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-220ENST00000555634 ICOSLGO75144 302 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 C1QCP02747 245 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 OPN1SWP03999 348 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 P04436 131 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 C8BP07358 591 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 CELA2AP08217 269 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 RAP2AP10114 183 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 UBL4AP11441 157 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 TBXA2RP21731 343 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 SOX3P41225 446 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 RGS8P57771 180 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-220ENST00000555634 SELENOWP63302 87 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 ARG2P78540 354 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 RHDQ02161 417 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 KCNC4Q03721 635 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 NTRK2Q16620 822 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 PDZK1Q5T2W1 519 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 ATP1A1-AS1Q5TC04 95 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 FCRLBQ6BAA4 426 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 H3F3CQ6NXT2 135 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 BORAQ6PGQ7 559 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 APLFQ8IW19 511 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-220ENST00000555634 ARMC10Q8N2F6 343 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 OR4N2Q8NGD1 307 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 FAM110BQ8TC76 370 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 NR4A3Q92570 626 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 UTP4Q969X6 686 aaKnown RBP10.31□□□□□ -0.76
SHMT2-220ENST00000555634 HSH2DQ96JZ2 352 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 C5orf34Q96MH7 638 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 OSBPL11Q9BXB4 747 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 SAP130Q9H0E3 1048 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 RUBCNLQ9H714 662 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 LIN28AQ9H9Z2 209 aaKnown RBP10.31□□□□□ -0.76
SHMT2-220ENST00000555634 STMN3Q9NZ72 180 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 SELENONQ9NZV5 590 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 CNIH4Q9P003 139 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 DTNAQ9Y4J8 743 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 KCNE3Q9Y6H6 103 aa10.31□□□□□ -0.76
SHMT2-220ENST00000555634 AKAP13Q12802 2813 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 PCSK5Q92824 1860 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 A0A1W2PQD3 144 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 MKRN2OSH3BPM6 223 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 AP3D1O14617 1153 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SCO2O43819 266 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 TSPAN2O60636 221 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 FCMRO60667 390 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SORBS2O94875 1100 aaKnown RBP10.3□□□□□ -0.76
SHMT2-220ENST00000555634 OXSR1O95747 527 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-220ENST00000555634 CSTAP01040 98 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 FABP3P05413 133 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 CYP4B1P13584 511 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 CD247P20963 164 aa10.3□□□□□ -0.76
SHMT2-220ENST00000555634 RPS4Y1P22090 263 aaKnown RBP10.3□□□□□ -0.76
SHMT2-220ENST00000555634 SLC6A8P48029 635 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms