RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 FAM118AQ9NWS6 357 aa9.14□□□□□ -0.95
PSEN1-213ENST00000555386 SPENQ96T58 3664 aaKnown RBP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 NINQ8N4C6 2090 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 A0A1W2PQ72 361 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 GABRR3A8MPY1 467 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 WWP2O00308 870 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 RNASET2O00584 256 aaKnown RBP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 PDPK1O15530 556 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 SEMG1P04279 462 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 GSNP06396 782 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 LAMP1P11279 417 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 DCKP27707 260 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 RYKP34925 604 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 MPIP34949 423 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 GPC1P35052 558 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 GSTM5P46439 218 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 CD97P48960 835 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ARHGDIAP52565 204 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 NFATC3Q12968 1075 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 C11orf91Q3C1V1 193 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 TRMT12Q53H54 448 aaKnown RBP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 CPTPQ5TA50 214 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ABHD17BQ5VST6 288 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 TCTN3Q6NUS6 607 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 DHRS4L2Q6PKH6 230 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 HSDL2Q6YN16 418 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF551Q7Z340 670 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 PIWIL3Q7Z3Z3 882 aaKnown RBP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ANKRD46Q86W74 232 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ZDHHC21Q8IVQ6 265 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ZZZ3Q8IYH5 903 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 VWA5B2Q8N398 1253 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 APCDD1LQ8NCL9 501 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 MORN4Q8NDC4 146 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 SIMC1Q8NDZ2 872 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 OR1N1Q8NGS0 311 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ELP5Q8TE02 316 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF721Q8TF20 911 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 PSMF1Q92530 271 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 TMIGD2Q96BF3 282 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ISOC1Q96CN7 298 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF681Q96N22 645 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 MBOAT4Q96T53 435 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 BHLHE41Q9C0J9 482 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 STMN3Q9NZ72 180 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ATP6V1HQ9UI12 483 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF223Q9UK11 482 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-213ENST00000555386 CSAG2Q9Y5P2 127 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 HSPE1-MOB4S4R3N1 261 aa9.13□□□□□ -0.95
PSEN1-213ENST00000555386 RP1L1Q8IWN7 2480 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 TRIM64BA6NI03 449 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 UGT2B11O75310 529 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 E2F6O75461 281 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 CEACAM4O75871 244 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ZFAND5O76080 213 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 CLIC3O95833 236 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 WDPCPO95876 746 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 KDELR2P33947 212 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 MC3RP41968 323 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 MANFP55145 182 aaKnown RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ARG2P78540 354 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 OC90Q02509 493 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 BIKQ13323 160 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 NNATQ16517 81 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 CRB2Q5IJ48 1285 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ACER2Q5QJU3 275 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 AP1ARQ63HQ0 302 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 OR2T5Q6IEZ7 315 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 JMJD6Q6NYC1 403 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 TMEM107Q6UX40 140 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ZNF621Q6ZSS3 439 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 KCTD8Q6ZWB6 473 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 CBLL1Q75N03 491 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 EIF3MQ7L2H7 374 aaKnown RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 SLC29A4Q7RTT9 530 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 R3HCC1LQ7Z5L2 792 aaKnown RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 RPS19BP1Q86WX3 136 aaKnown RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 CLVS1Q8IUQ0 354 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 BEST3Q8N1M1 668 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 SLC5A8Q8N695 610 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 SETD9Q8NE22 299 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 OR2T29Q8NH02 315 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 GOT1L1Q8NHS2 421 aaPredicted RBP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 MTERF3Q96E29 417 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ART5Q96L15 291 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.12□□□□□ -0.95
PSEN1-213ENST00000555386 SLC25A18Q9H1K4 315 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ADNPQ9H2P0 1102 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 GLIPR2Q9H4G4 154 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 EPS8L2Q9H6S3 715 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 TPT1P8Q9HAU6 139 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 SLAMF7Q9NQ25 335 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 ATAD3AQ9NVI7 634 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 MAT2BQ9NZL9 334 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 EHD3Q9NZN3 535 aa9.12□□□□□ -0.95
PSEN1-213ENST00000555386 TEKT2Q9UIF3 430 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms