RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ALDH3B2P48448 385 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 ACADVLP49748 655 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 NTHL1P78549 312 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 NUCB2P80303 420 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 ELP6Q0PNE2 266 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 RUNX3Q13761 415 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 CYP51A1Q16850 503 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 CCDC57Q2TAC2 916 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 OLFML2AQ68BL7 652 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 STAC2Q6ZMT1 411 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 UNC5CLQ8IV45 518 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 BPIFB2Q8N4F0 458 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 ZSCAN4Q8NAM6 433 aaPredicted RBP4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 RHOXF1Q8NHV9 184 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 DTNBP1Q96EV8 351 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 SDSLQ96GA7 329 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 DHX33Q9H6R0 707 aaKnown RBP4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 MEPEQ9NQ76 525 aaPredicted RBP4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 DUSP12Q9UNI6 340 aa4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 THOC2Q8NI27 1593 aaKnown RBP4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 POLA1P09884 1462 aaPredicted RBP4.17□□□□□ -1.74
CKS1BP1-201ENST00000555221 PRDM2Q13029 1718 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 USP6P35125 1406 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 IGKV3D-20A0A0C4DH25 116 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 GSAPA4D1B5 854 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 CCT8L1PA6NM43 557 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 PGAM2P15259 253 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 ADSSP30520 456 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 SOX6P35712 828 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 GNPDA1P46926 289 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 LMO4P61968 165 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 BDH1Q02338 343 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 Q1RN00 199 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 KRTAP27-1Q3LI81 207 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 TIMM50Q3ZCQ8 353 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 SLC36A3Q495N2 470 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 NCR3LG1Q68D85 454 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 FBXL22Q6P050 247 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 P2RY8Q86VZ1 359 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 LYG1Q8N1E2 194 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 PPP1R16AQ96I34 528 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 POLR3FQ9H1D9 316 aaPredicted RBP4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 UTP6Q9NYH9 597 aaKnown RBP4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 MRPL39Q9NYK5 338 aaKnown RBP4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 CGNQ9P2M7 1197 aaKnown RBP4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 RSPH14Q9UHP6 348 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 SPACA6W5XKT8 324 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 AQRO60306 1485 aaKnown RBP eCLIP4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 GAPVD1Q14C86 1478 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 ABCA10Q8WWZ4 1543 aa4.16□□□□□ -1.74
CKS1BP1-201ENST00000555221 RIMBP3CA6NJZ7 1639 aa4.15□□□□□ -1.74
CKS1BP1-201ENST00000555221 RIMBP3BA6NNM3 1639 aa4.15□□□□□ -1.74
CKS1BP1-201ENST00000555221 RIMBP3Q9UFD9 1639 aa4.15□□□□□ -1.74
CKS1BP1-201ENST00000555221 A8MUI8 341 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 A8MX80 341 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 CPLX1O14810 134 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 MBD3O95983 291 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 XRCC1P18887 633 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 IDSP22304 550 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 CDH5P33151 784 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 RPL4P36578 427 aaKnown RBP4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 RND3P61587 244 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 PAX2Q02962 417 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 ATXN7L3Q14CW9 347 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 TATDN3Q17R31 274 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 TEX44Q53QW1 395 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 SLC25A24Q6NUK1 477 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 C2orf66Q6UXQ4 117 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 LANCL3Q6ZV70 420 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 ARMCX2Q7L311 632 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 TMEM17Q86X19 198 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 Q8N9G6 341 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 ANKRD9Q96BM1 317 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 C4orf36Q96KX1 117 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 OR5M11Q96RB7 305 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 TMEM121Q9BTD3 319 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 ELOVL4Q9GZR5 314 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 DPM3Q9P2X0 92 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 SLC2A6Q9UGQ3 507 aa4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 MAGI1Q96QZ7 1491 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP1-201ENST00000555221 METP08581 1390 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 HCFC1P51610 2035 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 POGZQ7Z3K3 1410 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 FAM74A7A6NL05 159 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 CTAGE5O15320 804 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 GPAA1O43292 621 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 SLC2A10O95528 541 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 OPN1LWP04000 364 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 HBQ1P09105 142 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 UMPSP11172 480 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 PDHBP11177 359 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 ATP5A1P25705 553 aaKnown RBP4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 CALRP27797 417 aaKnown RBP4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 XCR1P46094 333 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 NOVA1P51513 510 aaKnown RBP4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 SLC25A1P53007 311 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 HSD17B7P56937 341 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 USH1GQ495M9 461 aa4.14□□□□□ -1.75
CKS1BP1-201ENST00000555221 FAM74A3Q4VXF1 159 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms