RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 HNRNPCL4P0DMR1 293 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 ABCD3P28288 659 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 YAP1P46937 504 aaKnown RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 TXNL4AP83876 142 aaKnown RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 TLE3Q04726 772 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 FAM98BQ52LJ0 330 aaKnown RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 HLA-DQA1Q5Y7H0 255 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 RAB43Q86YS6 212 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 ZNF619Q8N2I2 560 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 CLIP4Q8N3C7 705 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 ZNF614Q8N883 585 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 OR5M3Q8NGP4 307 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 OR52P1PQ8NH57 321 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 VANGL1Q8TAA9 524 aaPredicted RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 M1APQ8TC57 530 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 SPPL2AQ8TCT8 520 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 APOBEC4Q8WW27 367 aaKnown RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 NRG4Q8WWG1 115 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 ZNF607Q96SK3 696 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 ADOQ96SZ5 270 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 DEFB126Q9BYW3 111 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 STX18Q9P2W9 335 aaKnown RBP9.91□□□□□ -0.82
TDP1-211ENST00000555178 RIMS3Q9UJD0 308 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 RPS6KA6Q9UK32 745 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 CFL2Q9Y281 166 aa9.91□□□□□ -0.82
TDP1-211ENST00000555178 SYNDIG1LA6NDD5 238 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 OR6C76A6NM76 312 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 B4DXG7 233 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 J3KTA2 159 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 ADAM10O14672 748 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 SEMA7AO75326 666 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 RAP2AP10114 183 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 ETS2P15036 469 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 DRD5P21918 477 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 KCNJ5P48544 419 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 IST1P53990 364 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 HOXC5Q00444 222 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 CHRNB3Q05901 458 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 PLCXD2Q0VAA5 305 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 FOXD4Q12950 439 aaPredicted RBP9.9□□□□□ -0.82
TDP1-211ENST00000555178 GNA13Q14344 377 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 ZNF311Q5JNZ3 666 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 PDZK1Q5T2W1 519 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 BICRALQ6AI39 1079 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 ZFP1Q6P2D0 407 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 APOOLQ6UXV4 268 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 ZNF836Q6ZNA1 936 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 TSPYL5Q86VY4 417 aaPredicted RBP9.9□□□□□ -0.82
TDP1-211ENST00000555178 PQLC1Q8N2U9 271 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 METTL25Q8N6Q8 603 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 OR4C3Q8NH37 302 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 C7orf34Q96L11 122 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 PRR14Q9BWN1 585 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 SAP130Q9H0E3 1048 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 ARMC1Q9NVT9 282 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 VNN3Q9NY84 501 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 MYOTQ9UBF9 498 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 DKK4Q9UBT3 224 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 ZNF443Q9Y2A4 671 aaPredicted RBP9.9□□□□□ -0.82
TDP1-211ENST00000555178 PCDHGB3Q9Y5G1 929 aa9.9□□□□□ -0.82
TDP1-211ENST00000555178 AGAP5A6NIR3 686 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 UGT2B11O75310 529 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 ITGA10O75578 1167 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 ZFAND5O76080 213 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 PDE9AO76083 593 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 OR6B1O95007 311 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 SERPINA7P05543 415 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 UMPSP11172 480 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 RPS4Y1P22090 263 aaKnown RBP9.9□□□□□ -0.83
TDP1-211ENST00000555178 DCTP40126 519 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 SOX3P41225 446 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 FBXW4P57775 412 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 EXT1Q16394 746 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 LRRC36Q1X8D7 754 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 NDUFAF6Q330K2 333 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 IQCCQ4KMZ1 466 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 PRAMEF8Q5VWM4 474 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 PRAMEF7Q5VXH5 474 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 LPCAT4Q643R3 524 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 UNQ6494/PRO21346Q6UXR6 183 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 ZNF227Q86WZ6 799 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 KRT73Q86Y46 540 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 ZDHHC21Q8IVQ6 265 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 TMEM102Q8N9M5 508 aaPredicted RBP9.9□□□□□ -0.83
TDP1-211ENST00000555178 GATSQ8NAP1 163 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 PAPD5Q8NDF8 572 aaKnown RBP9.9□□□□□ -0.83
TDP1-211ENST00000555178 C7orf57Q8NEG2 295 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 SLC39A7Q92504 469 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 OMA1Q96E52 524 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 RASL10BQ96S79 203 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 UGT2B28Q9BY64 529 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 AMBRA1Q9C0C7 1298 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 ING2Q9H160 280 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 CALML5Q9NZT1 146 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 ZNF451Q9Y4E5 1061 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 PKD1L2Q7Z442 2459 aa9.9□□□□□ -0.83
TDP1-211ENST00000555178 USP24Q9UPU5 2620 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 C2orf72A6NCS6 295 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 K7EM74 188 aa9.89□□□□□ -0.83
TDP1-211ENST00000555178 TSPAN2O60636 221 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms