RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DCBLD2Q96PD2 775 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 ADOQ96SZ5 270 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 RNF32Q9H0A6 362 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 CDCP1Q9H5V8 836 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 HPF1Q9NWY4 346 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 GMPR2Q9P2T1 348 aaKnown RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 ANAPC2Q9UJX6 822 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 MKLN1Q9UL63 735 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 ZNF443Q9Y2A4 671 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-210ENST00000553950 SLC35A3Q9Y2D2 325 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 SLC9A8Q9Y2E8 581 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 NINQ8N4C6 2090 aa13.36□□□□□ -0.27
SHMT2-210ENST00000553950 TCRBV3S1A0A5B6 114 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 DHRS12A0PJE2 317 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 M0QX08 132 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 SORBS2O94875 1100 aaKnown RBP13.35□□□□□ -0.27
SHMT2-210ENST00000553950 MFN2O95140 757 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 UTS2O95399 124 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 ZNF682O95780 498 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 WT1P19544 449 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-210ENST00000553950 TBXA2RP21731 343 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 MSX2P35548 267 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-210ENST00000553950 SELENOWP63302 87 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 RHDQ02161 417 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 TLE3Q04726 772 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 SRSF6Q13247 344 aaKnown RBP13.35□□□□□ -0.27
SHMT2-210ENST00000553950 KPNB1Q14974 876 aaKnown RBP13.35□□□□□ -0.27
SHMT2-210ENST00000553950 ZNF311Q5JNZ3 666 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 TBCELQ5QJ74 424 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 ATP1A1-AS1Q5TC04 95 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 ISLR2Q6UXK2 745 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 RTL4Q6ZR62 310 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 SPPL2CQ8IUH8 684 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 PRR22Q8IZ63 422 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 SIRT6Q8N6T7 355 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 TM9SF4Q92544 642 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 TAMM41Q96BW9 452 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 DOHHQ9BU89 302 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 TBL1XR1Q9BZK7 514 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 GPR83Q9NYM4 423 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 RRP15Q9Y3B9 282 aaKnown RBP13.35□□□□□ -0.27
SHMT2-210ENST00000553950 DTNAQ9Y4J8 743 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 MED13Q9UHV7 2174 aa13.35□□□□□ -0.27
SHMT2-210ENST00000553950 ANKRD65E5RJM6 399 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 NPIPB9F8W1W9 429 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 K7ENP7 123 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 FCMRO60667 390 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 ICOSLGO75144 302 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 FKBP6O75344 327 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 UGT2B17O75795 530 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 OXSR1O95747 527 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-210ENST00000553950 IGKV1D-16P01601 117 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 CYP4B1P13584 511 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 UQCRBP14927 111 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 EVI2BP34910 448 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 SOX3P41225 446 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 CYB561P49447 251 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 KCNC4Q03721 635 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 CHRNB3Q05901 458 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 SNTA1Q13424 505 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 DEFB109BQ30KR1 87 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 IFI44LQ53G44 452 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-210ENST00000553950 FKBP9P1Q75LS8 142 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 CYP4Z2PQ8N1L4 340 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 ZNF614Q8N883 585 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 APOBEC4Q8WW27 367 aaKnown RBP13.34□□□□□ -0.27
SHMT2-210ENST00000553950 DENND2DQ9H6A0 471 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-210ENST00000553950 SDHAF3Q9NRP4 125 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 CNIH4Q9P003 139 aa13.34□□□□□ -0.27
SHMT2-210ENST00000553950 A0A087WV48 116 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 TCRBV5S2A0A599 114 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 PRAMEF25A6NGN4 478 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 ALG1L2C9J202 215 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 UGT2B11O75310 529 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 ZIC2O95409 532 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-210ENST00000553950 OPN1SWP03999 348 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 CAPNS1P04632 268 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 RAP2AP10114 183 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 FCGR1AP12314 374 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 ITGA2P17301 1181 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 ADH7P40394 386 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 KCNJ5P48544 419 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 HLCSP50747 726 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 MFAP5Q13361 173 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 CCNIQ14094 377 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 FGFBP1Q14512 234 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF791Q3KP31 576 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-210ENST00000553950 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 PDZK1Q5T2W1 519 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 AAGABQ6PD74 315 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 LYPD8Q6UX82 237 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 GRAMD2AQ8IUY3 354 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 BEST3Q8N1M1 668 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 PSMF1Q92530 271 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 NR4A3Q92570 626 aa13.33□□□□□ -0.28
SHMT2-210ENST00000553950 SLC47A1Q96FL8 570 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms