RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GNB5O14775 395 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 BCKDKO14874 412 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 HCN1O60741 890 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 ICOSLGO75144 302 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 UGT2B11O75310 529 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CBR3O75828 277 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CPSF4O95639 269 aaKnown RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 AGR2O95994 175 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CT45A8P0DMV1 189 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CT45A9P0DMV2 189 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 EFNA1P20827 205 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 LCN1P31025 176 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CHI3L1P36222 383 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 FRKP42685 505 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 MAGEA5P43359 124 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 NME5P56597 212 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 C21orf58P58505 322 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 POU6F2P78424 691 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 DUSP8Q13202 625 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 GAB1Q13480 694 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 LASP1Q14847 261 aaKnown RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 SF3B4Q15427 424 aaKnown RBP eCLIP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 PRSS53Q2L4Q9 553 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 HYAL4Q2M3T9 481 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CT45A2Q5DJT8 189 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CMPK2Q5EBM0 449 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 WLSQ5T9L3 541 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 C1QL3Q5VWW1 255 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 TMEM211Q6ICI0 200 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 OR4F3Q6IEY1 312 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 TMEM81Q6P7N7 255 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CAMKMTQ7Z624 323 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 SIAH3Q8IW03 269 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 RIMKLAQ8IXN7 391 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 SIMC1Q8NDZ2 872 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 OR4K17Q8NGC6 315 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 OR52N2Q8NGI0 321 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 SFXN5Q8TD22 340 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CKAP2Q8WWK9 683 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 HGDQ93099 445 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 TESCQ96BS2 214 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 EFHD2Q96C19 240 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 FAM120BQ96EK7 910 aaKnown RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 RMND5BQ96G75 393 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 TMEM41AQ96HV5 264 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 MAGEB18Q96M61 343 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 ACTRT3Q9BYD9 372 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 TBL1XR1Q9BZK7 514 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 WDR55Q9H6Y2 383 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 PTGES2Q9H7Z7 377 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 RMND5AQ9H871 391 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 SH2D2AQ9NP31 389 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 MED4Q9NPJ6 270 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 AIG1Q9NVV5 245 aa7.63□□□□□ -1.19
PSEN1-209ENST00000553855 FAM120CQ9NX05 1096 aaKnown RBP7.63□□□□□ -1.19
PSEN1-209ENST00000553855 CNTRLQ7Z7A1 2325 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 C15orf38-AP3S2A0A0A6YYH1 394 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 A0A0G2JMM0 328 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 RNF103-CHMP3A0A140T963 221 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 A0A1W2PPB8 328 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 A0A1W2PRS3 328 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 PINLYPA6NC86 204 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 CYSRT1A8MQ03 144 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 KIR3DP1A8MWS1 328 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 FAM47E-STBD1D6RA91 191 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 NPIPA2E9PIF3 369 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 NPIPA3F8WFD2 350 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 H3BNH8 94 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 SCDO00767 359 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ATP8B1O43520 1251 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 TSPAN2O60636 221 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 SLC22A3O75751 556 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 GLSO94925 669 aaPredicted RBP7.62□□□□□ -1.19
PSEN1-209ENST00000553855 NKX2-2O95096 273 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ANP32DO95626 131 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 IL33O95760 270 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 AK1P00568 194 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 HMGN2P05204 90 aaKnown RBP7.62□□□□□ -1.19
PSEN1-209ENST00000553855 IL6P05231 212 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 TROVE2P10155 538 aaKnown RBP eCLIP7.62□□□□□ -1.19
PSEN1-209ENST00000553855 UQCRC2P22695 453 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 CA7P43166 264 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 AQP5P55064 265 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 IRX1P78414 480 aaPredicted RBP7.62□□□□□ -1.19
PSEN1-209ENST00000553855 HPCAP84074 193 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 HSF1Q00613 529 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 PSG6Q00889 435 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 C3AR1Q16581 482 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 FAM174BQ3ZCQ3 159 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 PDCD4Q53EL6 469 aaKnown RBP7.62□□□□□ -1.19
PSEN1-209ENST00000553855 FAM209AQ5JX71 171 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ATAD3BQ5T9A4 648 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 TIGD3Q6B0B8 471 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 MFSD12Q6NUT3 480 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 NPSR1Q6W5P4 371 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 RPTNQ6XPR3 784 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 TRILQ7L0X0 811 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 THNSL2Q86YJ6 484 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 PLCZ1Q86YW0 608 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 MIER2Q8N344 545 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms