RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ARMC7Q9H6L4 198 aa13.02□□□□□ -0.32
RAB3IP-216ENST00000552199 PALMDQ9NP74 551 aa13.02□□□□□ -0.32
RAB3IP-216ENST00000552199 NLGN3Q9NZ94 848 aa13.02□□□□□ -0.32
RAB3IP-216ENST00000552199 MRPS33Q9Y291 106 aaKnown RBP13.02□□□□□ -0.32
RAB3IP-216ENST00000552199 LSM2Q9Y333 95 aaKnown RBP13.02□□□□□ -0.32
RAB3IP-216ENST00000552199 CORINQ9Y5Q5 1042 aa13.02□□□□□ -0.32
RAB3IP-216ENST00000552199 PRUNE2Q8WUY3 3088 aa13.02□□□□□ -0.33
RAB3IP-216ENST00000552199 HYKKA2RU49 373 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 J3QRK9 145 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 PIP5K1CO60331 668 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 KCNK2O95069 426 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 MLLT3P42568 568 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 GFERP55789 205 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 IGLV3-21P80748 117 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 STX4Q12846 297 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNF846Q147U1 533 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 NR1D2Q14995 579 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 GARNL3Q5VVW2 1013 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 C19orf48Q6RUI8 117 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 SPEM1Q8N4L4 309 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 FNDC8Q8TC99 324 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 ADAMTS18Q8TE60 1221 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 OSTF1Q92882 214 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 TGM7Q96PF1 710 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 PRSS27Q9BQR3 290 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 LMF2Q9BU23 707 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 SLIRPQ9GZT3 109 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 OR51E2Q9H255 320 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 FOLH1BQ9HBA9 442 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 ZBTB20Q9HC78 741 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 PRTFDC1Q9NRG1 225 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 CLEC2DQ9UHP7 191 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 ERGIC3Q9Y282 383 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 IGHV5-51A0A0C4DH38 117 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 TLCD2A6NGC4 264 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 CLDN25C9JDP6 229 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 HRO43593 1189 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 FMO6PO60774 539 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 GKN3PP0CG01 181 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 IL9P15248 144 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 HTR2AP28223 471 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 GPR4P46093 362 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 PPM1FP49593 454 aaPredicted RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 EMDP50402 254 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 LIMK1P53667 647 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 MAT1AQ00266 395 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 SRSF5Q13243 272 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 OR1Q1Q15612 314 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 TSTQ16762 297 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 C14orf28Q4W4Y0 310 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 C16orf87Q6PH81 154 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 ZAR1Q86SH2 424 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 SLC34A3Q8N130 599 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 CACTIN-AS1Q8N1I8 211 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 POGLUT1Q8NBL1 392 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 OR6Q1Q8NGQ2 317 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 RIT1Q92963 219 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 RBM18Q96H35 190 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 SLC38A2Q96QD8 506 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 RAB33BQ9H082 229 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 CAPN10Q9HC96 672 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 PDE7BQ9NP56 450 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 AKIP1Q9NQ31 210 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 FBXO8Q9NRD0 319 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 IL20Q9NYY1 176 aa13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 TESQ9UGI8 421 aaKnown RBP13.01□□□□□ -0.33
RAB3IP-216ENST00000552199 SPTBP11277 2137 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CCRL2O00421 344 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CLDN4O14493 209 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 SDC3O75056 442 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 LYPD3O95274 346 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 GUSBP08236 651 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CKMT1AP12532 417 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 GNSP15586 552 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 FNTBP49356 437 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 BTG2P78543 158 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 PSG6Q00889 435 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 DOC2BQ14184 412 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ERV3-1Q14264 604 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ZNHIT3Q15649 155 aaPredicted RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 FLYWCH1Q4VC44 716 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ZC3H14Q6PJT7 736 aaKnown RBP13□□□□□ -0.33
RAB3IP-216ENST00000552199 SLC36A4Q6YBV0 504 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 ATCAYQ86WG3 371 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 SIX5Q8N196 739 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CAMKK1Q8N5S9 505 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 NANOGP1Q8N7R0 232 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 OR52I1Q8NGK6 324 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 S100ZQ8WXG8 99 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 OPALINQ96PE5 141 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 MND1Q9BWT6 205 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 TAPBPLQ9BX59 468 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 PRRG3Q9BZD7 231 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 CHRNA10Q9GZZ6 450 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 RACGAP1Q9H0H5 632 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 EVA1AQ9H8M9 152 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 HMG20AQ9NP66 347 aa13□□□□□ -0.33
RAB3IP-216ENST00000552199 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms