RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 UMODL1Q5DID0 1318 aa5.65□□□□□ -1.51
VPS29-210ENST00000552130 KBTBD11-OT1A0A1B0GTJ5 212 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 A0A1B0GUA9 196 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 SH3PXD2BA1X283 911 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 FABP12A6NFH5 140 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 E7ESA3 106 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 E9PQ18 207 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 PRAMEF26H0Y7S4 382 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 CCL24O00175 119 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 ARPC2O15144 300 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 LPXNO60711 386 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 NSA2O95478 260 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 CST4P01036 141 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 GAPDHP04406 335 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 RPN2P04844 631 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 SERPINA6P08185 405 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 PRF1P14222 555 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 ARSBP15848 533 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 TBXA2RP21731 343 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 CD1CP29017 333 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 CFHR2P36980 270 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 MATKP42679 507 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 CDKN2CP42773 168 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 NOVA1P51513 510 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 EFNB2P52799 333 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 RAB14P61106 215 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 OSTNP61366 133 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 ADARB1P78563 741 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 EWSR1Q01844 656 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS29-210ENST00000552130 CYTH1Q15438 398 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 RAB6CQ53S08 254 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 ENTPD8Q5MY95 495 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 PAPD7Q5XG87 772 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 TIGD3Q6B0B8 471 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 DPY19L2P2Q6ZN68 376 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 GCNT7Q6ZNI0 430 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 C19orf35Q6ZS72 473 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 SFR1Q86XK3 245 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 CACUL1Q86Y37 369 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 C8orf31Q8N9H6 132 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 KBTBD3Q8NAB2 608 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 ADAD2Q8NCV1 583 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 PPFIBP2Q8ND30 876 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 RNF128Q8TEB7 428 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 LRRC15Q8TF66 581 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 ZNF333Q96JL9 665 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 SLC30A2Q9BRI3 323 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 RAB6CQ9H0N0 254 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 OR51V1Q9H2C8 321 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 UGT1A10Q9HAW8 530 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 CD209Q9NNX6 404 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 ACKR4Q9NPB9 350 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 TECRQ9NZ01 308 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 MYEF2Q9P2K5 600 aaKnown RBP5.64□□□□□ -1.51
VPS29-210ENST00000552130 CLN8Q9UBY8 286 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 KLHDC2Q9Y2U9 406 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 COLEC10Q9Y6Z7 277 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 URGCP-MRPS24S4R325 110 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 PTPRUQ92729 1446 aa5.64□□□□□ -1.51
VPS29-210ENST00000552130 A0A0G2JLW4 131 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 A0A1W2PP11 408 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 SHISA7A6NL88 538 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 RNASEK-C17orf49H0YIS7 233 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 CYB561D2O14569 222 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 OR7A17O14581 309 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 RFXANKO14593 260 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 BRI3O95415 125 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 ETHE1O95571 254 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 WNT1P04628 370 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 KRT7P08729 469 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 TRIM49P0CI25 452 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 TRIM49CP0CI26 452 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 CD59P13987 128 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 HNRNPH1P31943 449 aaKnown RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 HPCAL1P37235 193 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 CSNK1DP48730 415 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 MRPL19P49406 292 aaKnown RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 PCYT1AP49585 367 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 DUSP3P51452 185 aaPredicted RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 HMGCS2P54868 508 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 ELLP55199 621 aaPredicted RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 ERVK-25P63136 954 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 KLC1Q07866 573 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 MADCAM1Q13477 382 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 C1orf61Q13536 156 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 CEACAM7Q14002 265 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 OR1C1Q15619 314 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 PHKG1Q16816 387 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 C5orf47Q569G3 176 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 DMKNQ6E0U4 476 aaPredicted RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 TTC33Q6PID6 262 aaPredicted RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 RANBP3LQ86VV4 465 aaPredicted RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 TMEM17Q86X19 198 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 TERB1Q8NA31 727 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 LRRC75AQ8NAA5 344 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 FAM98AQ8NCA5 519 aaKnown RBP5.63□□□□□ -1.51
VPS29-210ENST00000552130 OR13J1Q8NGT2 312 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 FGFBP3Q8TAT2 258 aa5.63□□□□□ -1.51
VPS29-210ENST00000552130 SLC38A5Q8WUX1 472 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms