RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 OR2A1Q8NGT9 310 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 HMGCLL1Q8TB92 370 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 LKAAEAR1Q8TD35 194 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 FAM216AQ8WUB2 273 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 NRGNQ92686 78 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SYN2Q92777 582 aaPredicted RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CCDC47Q96A33 483 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SCMH1Q96GD3 660 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ZNF778Q96MU6 729 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 RAB3IPQ96QF0 476 aaPredicted RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 OR2A5Q96R48 311 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 POLR1EQ9GZS1 481 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 AICDAQ9GZX7 198 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 WWP1Q9H0M0 922 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ZWILCHQ9H900 591 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 MCCC2Q9HCC0 563 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 SYTL2Q9HCH5 934 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 OLAHQ9NV23 265 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PARVAQ9NVD7 372 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 HRASLS2Q9NWW9 162 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 HAO2Q9NYQ3 351 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 AKAP7Q9P0M2 348 aaPredicted RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CRNNQ9UBG3 495 aaPredicted RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 DHCR7Q9UBM7 475 aaKnown RBP2.16□□□□□ -2.06
CPSF6-207ENST00000551516 CTSFQ9UBX1 484 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 GAGE2DQ9UEU5 116 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 LNPEPQ9UIQ6 1025 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 TINAGQ9UJW2 476 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 OSGIN1Q9UJX0 560 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ANAPC5Q9UJX4 755 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 FBXL4Q9UKA2 621 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 MEMO1Q9Y316 297 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 ARL5AQ9Y689 179 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 PCM1Q15154 2024 aa2.16□□□□□ -2.06
CPSF6-207ENST00000551516 IGKV3D-11A0A0A0MRZ8 115 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 IGHV1-45A0A0A0MS14 117 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CD8B2A6NJW9 211 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 OR2AG2A6NM03 316 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 C15orf62A8K5M9 175 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM150CB9EJG8 249 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNHIT1O43257 154 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 BUD23O43709 281 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SSX4O60224 188 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF354AO60765 605 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 DIAPH2O60879 1101 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SRP72O76094 671 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SLCO2B1O94956 709 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 FGFR1OPO95684 399 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 WDPCPO95876 746 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 TBX6O95947 436 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 HPP00738 406 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 AGTP01019 485 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 GYPCP04921 128 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 LINGO3P0C6S8 592 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 POLR2CP19387 275 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 IDSP22304 550 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 DNASE1P24855 282 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 HRH2P25021 359 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 LMO1P25800 156 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 LOXP28300 417 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PKLRP30613 574 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SSTR2P30874 369 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CASP14P31944 242 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CCR7P32248 378 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 FOXN2P32314 431 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PCGF2P35227 344 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 OPRM1P35372 400 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CYLC1P35663 651 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 SLC26A3P40879 764 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 MTIF2P46199 727 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ARCN1P48444 511 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF81P51508 661 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF75DP51815 510 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 IST1P53990 364 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 HADHBP55084 474 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CLDN20P56880 219 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CD81P60033 236 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 RPS15P62841 145 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CSNK1G2P78368 415 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 DCDP81605 110 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 RELAQ04206 551 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 KLC1Q07866 573 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CRYZQ08257 329 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 UBE2V1Q13404 147 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PIGHQ14442 188 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 PDK2Q15119 407 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 INAQ16352 499 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 CCSMST1Q4G0I0 132 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM35AQ53FP2 167 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 KRTCAP3Q53RY4 240 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 C6orf163Q5TEZ5 329 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ALS2CLQ60I27 953 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 FRMPD2BQ6IN97 320 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 IRGCQ6NXR0 463 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 C8orf82Q6P1X6 216 aaPredicted RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ALKBH5Q6P6C2 394 aaKnown RBP2.15□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF549Q6P9A3 640 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 XKRXQ6PP77 449 aa2.15□□□□□ -2.07
CPSF6-207ENST00000551516 MFSD7Q6UXD7 560 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms