RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ISLR2Q6UXK2 745 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 GOLGA7Q7Z5G4 137 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 ADCK1Q86TW2 530 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 NCLNQ969V3 563 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 ST6GALNAC5Q9BVH7 336 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 EGLN1Q9GZT9 426 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 HEXA-AS1Q9H8Q6 139 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 NRN1Q9NPD7 142 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 NGBQ9NPG2 151 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 TAS2R3Q9NYW6 316 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 MOB4Q9Y3A3 225 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 CPQQ9Y646 472 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 PSME4Q14997 1843 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 SH3TC1Q8TE82 1336 aa3.93□□□□□ -1.78
LIMA1-205ENST00000550592 ANKRD36CQ5JPF3 1778 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 NPIPA5A0A0B4J1W7 369 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 IGHV3-16A0A0C4DH30 117 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 NPIPA5E9PKD4 350 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 CYB561D2O14569 222 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 CXCL11O14625 94 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 GSTA1P08263 222 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 IL9P15248 144 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 CYP2B6P20813 491 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 PRDX2P32119 198 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 GPC3P51654 580 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 NAAAQ02083 359 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 RAPSNQ13702 412 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 CEBPEQ15744 281 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 ZKSCAN8Q15776 578 aaPredicted RBP3.92□□□□□ -1.78
LIMA1-205ENST00000550592 UNC5DQ6UXZ4 953 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 GET4Q7L5D6 327 aaPredicted RBP3.92□□□□□ -1.78
LIMA1-205ENST00000550592 PYROXD2Q8N2H3 581 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 CSNK1G2-AS1Q8NCQ2 148 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 C17orf47Q8NEP4 570 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 BEST4Q8NFU0 473 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 TAF4BQ92750 862 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 GPR174Q9BXC1 333 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 LRRCC1Q9C099 1032 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 COA1Q9GZY4 146 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 IL1RL2Q9HB29 575 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 TRMT112Q9UI30 125 aaKnown RBP3.92□□□□□ -1.78
LIMA1-205ENST00000550592 KLK13Q9UKR3 277 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 IKZF3Q9UKT9 509 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF346Q9UL40 294 aaKnown RBP3.92□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF490Q9ULM2 529 aaPredicted RBP3.92□□□□□ -1.78
LIMA1-205ENST00000550592 PLXNA3P51805 1871 aa3.92□□□□□ -1.78
LIMA1-205ENST00000550592 MAST2Q6P0Q8 1798 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 COL4A6Q14031 1691 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 TEX48A0A1B0GUV7 120 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 LRRC37AA6NMS7 1700 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 E9PMD0 336 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 SGK494L7N484 410 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 CFLARO15519 480 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ECDO95905 644 aaPredicted RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 CGAP01215 116 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 FCGR3AP08637 254 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 CYP11B1P15538 503 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 IL4RP24394 825 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 CALML3P27482 149 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 PTPN6P29350 595 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 PGFP49763 221 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 MS4A2Q01362 244 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 FCHO2Q0JRZ9 810 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 PCK2Q16822 640 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 LINC00242Q5T6M2 205 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 TAF3Q5VWG9 929 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 EMBQ6PCB8 327 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ATRAIDQ6UW56 229 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 GPRIN3Q6ZVF9 776 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 PAQR9Q6ZVX9 377 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 STXBP4Q6ZWJ1 553 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 TMUB2Q71RG4 321 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 LUZP1Q86V48 1076 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 VPS36Q86VN1 386 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 GPBP1Q86WP2 473 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 LRRC49Q8IUZ0 686 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 SPATA3Q8NHX4 192 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 WDR36Q8NI36 951 aaKnown RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 DLX4Q92988 240 aaPredicted RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 WRAP53Q9BUR4 548 aaKnown RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ALG9Q9H6U8 611 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 UBE2ZQ9H832 354 aaPredicted RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ECT2Q9H8V3 914 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ROPN1Q9HAT0 212 aaPredicted RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 GNB4Q9HAV0 340 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ELL3Q9HB65 397 aaPredicted RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ZNF446Q9NWS9 450 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 HPF1Q9NWY4 346 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 SEC14L4Q9UDX3 406 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 MRPL11Q9Y3B7 192 aaKnown RBP3.91□□□□□ -1.78
LIMA1-205ENST00000550592 OTOFQ9HC10 1997 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 KIF20BQ96Q89 1820 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 ZFHX4Q86UP3 3567 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 USP24Q9UPU5 2620 aa3.91□□□□□ -1.78
LIMA1-205ENST00000550592 CEMIPQ8WUJ3 1361 aa3.9□□□□□ -1.78
LIMA1-205ENST00000550592 A0A0G2JMZ2 1700 aa3.9□□□□□ -1.78
LIMA1-205ENST00000550592 CEP250Q9BV73 2442 aa3.9□□□□□ -1.78
LIMA1-205ENST00000550592 PDLIM1O00151 329 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 EI24O14681 340 aa3.9□□□□□ -1.79
LIMA1-205ENST00000550592 NDUFA7O95182 113 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms