RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SFXN2Q96NB2 322 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 G6PC3Q9BUM1 346 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 BTBD2Q9BX70 525 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 ACTRT3Q9BYD9 372 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 HHATLQ9HCP6 504 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 AIG1Q9NVV5 245 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 GIN1Q9NXP7 522 aa15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 MRPS18CQ9Y3D5 142 aaKnown RBP15.66■□□□□ 0.1
CHMP1A-208ENST00000550102 C17orf51A8MQB3 221 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 E9PBE3 544 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 ANKRD28O15084 1053 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 SOX30O94993 753 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 ALDOCP09972 364 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 COX6B1P14854 86 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 H2AFXP16104 143 aaPredicted RBP15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 EPHA3P29320 983 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 DSCR4P56555 118 aaPredicted RBP15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 SPATA19Q7Z5L4 167 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 MARCH3Q86UD3 253 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 WDR75Q8IWA0 830 aaKnown RBP15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 CLECL1Q8IZS7 167 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 OR4A15Q8NGL6 344 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 OR5AK3PQ8NH89 298 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 LILRB4Q8NHJ6 448 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 CDS1Q92903 461 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 WDYHV1Q96HA8 205 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 DSN1Q9H410 356 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 PIGUQ9H490 435 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 RUBCNLQ9H714 662 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 PTGES2Q9H7Z7 377 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 GPATCH2Q9NW75 528 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 PCDHGB4Q9UN71 923 aa15.65■□□□□ 0.1
CHMP1A-208ENST00000550102 A0A0G2JNJ9 132 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 GOLGA8QA0A0J9YX86 632 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 RNF103-CHMP3A0A140T963 221 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 GOLGA8OA6NCC3 632 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 B4DXG7 233 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ALG1L2C9J202 215 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 GOLGA8NF8WBI6 632 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 H0Y3Z8 333 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 OXSR1O95747 527 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ANGPTL1O95841 491 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 CPN1P15169 458 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 HPGDP15428 266 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 TBXA2RP21731 343 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 TCEA1P23193 301 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ADH7P40394 386 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ZFP36L2P47974 494 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 GFRA1P56159 465 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 WNT3P56703 355 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 C17orf67Q0P5P2 114 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 RCAN2Q14206 197 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 TTMPQ5BVD1 217 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 CCNJQ5T5M9 372 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ANXA8L1Q5VT79 327 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 VPS37AQ8NEZ2 397 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 FAM110BQ8TC76 370 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ADAMTS15Q8TE58 950 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ZNF75CPQ92670 426 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 RTN4RQ9BZR6 473 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 WDR55Q9H6Y2 383 aaPredicted RBP15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 VIPAS39Q9H9C1 493 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 KCNJ16Q9NPI9 418 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 UBQLN4Q9NRR5 601 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 Q9UFV3 132 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 ANKHD1Q8IWZ3 2542 aaKnown RBP15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 MED12LQ86YW9 2145 aa15.64■□□□□ 0.09
CHMP1A-208ENST00000550102 IGLV3-32A0A0A0MS00 114 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 HMGB1P1B2RPK0 211 aaPredicted RBP15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 C19orf84I3L1E1 186 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 NDUFB5O43674 189 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 EPPINO95925 133 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 ATP6V1C1P21283 382 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 CHMP24386 653 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 FAM174BQ3ZCQ3 159 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 SPANXN4Q5MJ08 99 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 RAET1LQ5VY80 246 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 NSUN5P2Q63ZY6 315 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 NXNQ6DKJ4 435 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 ZAR1Q86SH2 424 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 ANKRD46Q86W74 232 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 OR4C3Q8NH37 302 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 PIWIL2Q8TC59 973 aaKnown RBP15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 DUSP19Q8WTR2 217 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 SLC35G5Q96KT7 338 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 ZBTB18Q99592 522 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 SH3GL2Q99962 352 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 MED11Q9P086 117 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 RPH3AQ9Y2J0 694 aaPredicted RBP15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 TACC2O95359 2948 aa15.63■□□□□ 0.09
CHMP1A-208ENST00000550102 PRSS51A0A1B0GVH4 220 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 NKX2-6A6NCS4 301 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 CD8B2A6NJW9 211 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 HSPB2A8KAH6 182 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 SCDO00767 359 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 ZIC3O60481 467 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 IDO1P14902 403 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 HK1P19367 917 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 S100A3P33764 101 aa15.62■□□□□ 0.09
CHMP1A-208ENST00000550102 LHX2P50458 406 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms